Q9C1N5_COPSC (Coprinopsis scobicola)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Q9C1N5_COPSC T226950_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9C1N5_COPSC
M02216_2.00		 Coprinopsis scobicola
NBCAATCVN
NBGATTGVN		 PBM
Weirauch et al.(2014)
pTH5843		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q00354_COPCI
M02160_2.00 		Coprinopsis cinerea
ACCAATCV
BGATTGGT		 PBM
Weirauch et al.(2014)
pTH6354 		0.718 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02216_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
Q9C1N5_COPSC Homeodomain 148 204

Links

Other Homeodomain family TFs
Other Coprinopsis scobicola TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q00354_COPCI Coprinopsis cinerea Q00354_COPCI D 0.718
CC1G_01833 Coprinopsis cinerea CC1G_01833 I 0.688
CC1G_13704 Coprinopsis cinerea CC1G_13704 I 0.686
CapteG129681 Capitella teleta CapteG129681 I 0.610
NEMVEDRAFT_v1g150808 Nematostella vectensis NEMVEDRAFT_v1g150808 I 0.600