29848.m004652 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 29848.m004652 T226988_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29848.m004652 Homeodomain 266 318

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_038389 Theobroma cacao TCM_038389 N 0.821
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.800
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.775
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.768
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.753
Pm004594 Prunus mume Pm004594 N 0.753
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.745
Cla021272 Citrullus lanatus Cla021272 N 0.733
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.733
MDP0000119866 Malus domestica MDP0000119866 N 0.728
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.719
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.719
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.719
MDP0000202143 Malus domestica MDP0000202143 N 0.717
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.690
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.686
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.686
PK00680.1 Cannabis sativa PK00680.1 N 0.675
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.671
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.671
OCP3 Arabidopsis thaliana AT5G11270 N 0.671
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.671
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.669
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.661
Bo9g171420 Brassica oleracea Bo9g171420 N 0.661
Bra008975 Brassica rapa Bra008975 N 0.661
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.658
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.658
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.656
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.645
OB06G27850 Oryza brachyantha OB06G27850 N 0.644
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.627
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.625
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.625
mgf000632m Mimulus guttatus mgf000632m N 0.624
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.623
OS06G0601000 Oryza sativa OS06G0601000 N 0.623
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.623
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.623
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.623
OBART06G20210 Oryza barthii OBART06G20210 N 0.623
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.623
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.620
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.620
POPTR_0006s26790 Populus trichocarpa POPTR_0006s26790 N 0.616