CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30202.m000250
(
Ricinus communis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
30202.m000250
T227022_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA
TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.226
1.000
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.226
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30202.m000250
Homeodomain
34
53
ARQRWTPTPVQLQILERIFD
Links
Other
Homeodomain
family TFs
Other
Ricinus communis
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy