cassava13400.valid.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava13400.valid.m1 T227033_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava13400.valid.m1 Homeodomain 1 40

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mgf006959m Mimulus guttatus mgf006959m N 0.865
OLONG_008306 Oryza longistaminata OLONG_008306 N 0.865
GRMZM2G004334 Zea mays GRMZM2G004334 N 0.865
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N 0.865
GRMZM2G123140 Zea mays GRMZM2G123140 I 0.855
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N 0.855
MDP0000690933 Malus domestica MDP0000690933 N 0.843
Carubv10007218m.g Capsella rubella Carubv10007218m.g N 0.837
OLONG_012459 Oryza longistaminata OLONG_012459 N 0.831
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N 0.830
GSMUA_Achr3G23090_001 Musa acuminata GSMUA_Achr3G23090_001 N 0.822
TCM_016582 Theobroma cacao TCM_016582 I 0.822
PDK_20s1347391g002 Phoenix dactylifera PDK_20s1347391g002 N 0.822
Gorai.003G184900 Gossypium raimondii Gorai.003G184900 I 0.822
Pavir.Fa02028 Panicum virgatum Pavir.Fa02028 N 0.822
gene23926-v1.0-hybrid Fragaria vesca gene23926-v1.0-hybrid N 0.822
Traes_6DL_D722B6E13 Triticum aestivum Traes_6DL_D722B6E13 N 0.812
BRADI3G23370 Brachypodium distachyon BRADI3G23370 N 0.811
PDK_20s1410161g001 Phoenix dactylifera PDK_20s1410161g001 N 0.810
LjT36I04.40.nd Lotus japonicus LjT36I04.40.nd N 0.810
PGSC0003DMG400013263 Solanum tuberosum PGSC0003DMG400013263 N 0.809
Ca_08015 Cicer arietinum Ca_08015 N 0.795
gene25833-v1.0-hybrid Fragaria vesca gene25833-v1.0-hybrid N 0.774
BRADI2G50510 Brachypodium distachyon BRADI2G50510 N 0.774
PGSC0003DMG400019030 Solanum tuberosum PGSC0003DMG400019030 N 0.772
F775_10961 Aegilops tauschii F775_10961 N 0.768
GLYMA08G09430 Glycine max GLYMA08G09430 N 0.760
OMERI08G08060 Oryza meridionalis OMERI08G08060 N 0.753
OLONG_017944 Oryza longistaminata OLONG_017944 N 0.750
OS01G0788800 Oryza sativa OS01G0788800 N 0.750
Traes_3AL_F42853DA5 Triticum aestivum Traes_3AL_F42853DA5 N 0.741
Bo1g131210 Brassica oleracea Bo1g131210 N 0.723
TRIUR3_32002 Triticum urartu TRIUR3_32002 N 0.695
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N 0.693
Ca_19697 Cicer arietinum Ca_19697 N 0.693
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N 0.688
PGSC0003DMG400007775 Solanum tuberosum PGSC0003DMG400007775 N 0.686
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N 0.685
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N 0.685
Minc02159 Meloidogyne incognita Minc02159 N 0.685
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I 0.684
TRAES3BF096700010CFD_g Triticum aestivum TRAES3BF096700010CFD_g N 0.682
GI23625 Drosophila mojavensis FBgn0146351 N 0.678
csin109617 Clonorchis sinensis csin109617 N 0.677
TRIUR3_29318 Triticum urartu TRIUR3_29318 N 0.674
TLX3 Taeniopygia guttata ENSTGUG00000014966 N 0.672
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N 0.672
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N 0.672
ENSPTRG00000017522 Pan troglodytes ENSPTRG00000017522 N 0.672
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N 0.672
nRc.2.0.1.g21365 Romanomermis culicivorax nRc.2.0.1.g21365 N 0.669
TRAES3BF096700040CFD_g Triticum aestivum TRAES3BF096700040CFD_g N 0.666
AEPI010666 Anopheles epiroticus AEPI010666 N 0.665
YQE_10731 Dendroctonus ponderosae YQE_10731 N 0.665
SINV22981 Solenopsis invicta SINV22981 N 0.665
AQUA015309 Anopheles quadriannulatus AQUA015309 N 0.665
scaffold61-EXSNAP2012.75 Pristionchus exspectatus scaffold61-EXSNAP2012.75 N 0.663
VAX1 Loxodonta africana ENSLAFG00000018107 N 0.660
ENSSHAG00000009294 Sarcophilus harrisii ENSSHAG00000009294 I 0.659
ENSTRUG00000017602 Takifugu rubripes ENSTRUG00000017602 N 0.656
PPA28666 Pristionchus pacificus PPA28666 N 0.655
nRc.2.0.1.g08298 Romanomermis culicivorax nRc.2.0.1.g08298 N 0.653
PHUM118950 Pediculus humanus PHUM118950 N 0.651
AFAF006159 Anopheles farauti AFAF006159 I 0.651
EMX1 Oryctolagus cuniculus ENSOCUG00000008208 N 0.651
HelroG192586 Helobdella robusta HelroG192586 N 0.651
LDEC017208 Leptinotarsa decemlineata LDEC017208 N 0.651
SNAPOd2T00015975001 Oikopleura dioica SNAPOd2T00015975001 N 0.646
nkx6-1 Xenopus tropicalis XB-GENE-483574 I 0.645
ENSOARG00000003161 Ovis aries ENSOARG00000003161 I 0.645
SMU15011671 Schmidtea mediterranea SMU15011671 I 0.645
NKX6-1 Homo sapiens ENSG00000163623 D 0.645
ACUA011088 Anopheles culicifacies ACUA011088 N 0.645
TCLT_0000655201 Thelazia callipaeda TCLT_0000655201 I 0.645
YQE_12889 Dendroctonus ponderosae YQE_12889 N 0.645
MCINX004708 Melitaea cinxia MCINX004708 N 0.645
MESCA006388 Megaselia scalaris MESCA006388 N 0.645
tlx2 Danio rerio ENSDARG00000011273 I 0.645
SPER_0001142801 Spirometra erinaceieuropaei SPER_0001142801 I 0.645
ACYPI086517 Acyrthosiphon pisum ACYPI086517 N 0.645
ACEP22770 Atta cephalotes ACEP22770 N 0.645
RPRC003713 Rhodnius prolixus RPRC003713 N 0.645
TRE_0000385401 Trichobilharzia regenti TRE_0000385401 N 0.645
VAX2 Sus scrofa ENSSSCG00000008318 N 0.645
Cmyd_10007464 Chelonia mydas Cmyd_10007464 I 0.645
Tlx1 Mus musculus ENSMUSG00000025215 I 0.645
PHUM359880 Pediculus humanus PHUM359880 N 0.645
PHUM359910 Pediculus humanus PHUM359910 N 0.645
Sjc_0085440 Schistosoma japonicum Sjc_0085440 N 0.645
LDEC009173 Leptinotarsa decemlineata LDEC009173 N 0.645
AEPI002733 Anopheles epiroticus AEPI002733 N 0.645
PPAI004705 Phlebotomus papatasi PPAI004705 N 0.645
BTMF_0001416601 Brugia timori BTMF_0001416601 N 0.645
ENSTNIG00000016273 Tetraodon nigroviridis ENSTNIG00000016273 I 0.645
PPAI006607 Phlebotomus papatasi PPAI006607 I 0.645
PXEA_0003635301 Protopolystoma xenopodis PXEA_0003635301 N 0.645
ENSXMAG00000003902 Xiphophorus maculatus ENSXMAG00000003902 I 0.645
nDi.2.2.2.g10664 Dirofilaria immitis nDi.2.2.2.g10664 I 0.645
ISCW012145 Ixodes scapularis ISCW012145 N 0.645
ISCW010454 Ixodes scapularis ISCW010454 N 0.645
AMAM008009 Anopheles maculatus AMAM008009 N 0.645
KGM_17085 Danaus plexippus KGM_17085 N 0.645
LACBIDRAFT_243459 Laccaria bicolor LACBIDRAFT_243459 N 0.643
ENSOARG00000010209 Ovis aries ENSOARG00000010209 N 0.642
ENSPVAG00000007998 Pteropus vampyrus ENSPVAG00000007998 N 0.640
Tal_R011355 Tyto alba Tal_R011355 N 0.637
SPU_022574 Strongylocentrotus purpuratus SPU_022574 N 0.637
ACHR008505 Anopheles christyi ACHR008505 N 0.634
ACUA020431 Anopheles culicifacies ACUA020431 N 0.634
AEPI010384 Anopheles epiroticus AEPI010384 N 0.634
AMIN006246 Anopheles minimus AMIN006246 N 0.633
PPAI007203 Phlebotomus papatasi PPAI007203 N 0.633
ENSCJAG00000004205 Callithrix jacchus ENSCJAG00000004205 I 0.632
ASTEI00742 Anopheles stephensi ASTEI00742 N 0.632
AFUN002980 Anopheles funestus AFUN002980 N 0.632
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N 0.631
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N 0.631
maker-nMf.1.1.scaf28435-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf28435-augustus-gene-0.3 N 0.630
ENSGALG00000020423 Gallus gallus ENSGALG00000020423 N 0.628
F775_07305 Aegilops tauschii F775_07305 N 0.628
CLEC004114 Cimex lectularius CLEC004114 N 0.627
Traes_1AS_CA75913B6 Triticum aestivum Traes_1AS_CA75913B6 N 0.626
NECAME_08983 Necator americanus NECAME_08983 N 0.625
TRIUR3_33331 Triticum urartu TRIUR3_33331 N 0.624
HMEL006102 Heliconius melpomene HMEL006102 N 0.624
Ca_23643 Cicer arietinum Ca_23643 N 0.624
DICVIV_02944 Dictyocaulus viviparus DICVIV_02944 N 0.623
BGIBMGA010052 Bombyx mori BGIBMGA010052 N 0.623
K443DRAFT_111002 Laccaria amethystina K443DRAFT_111002 N 0.622
THITE_2107332 Thielavia terrestris THITE_2107332 I 0.622
Eucgr.D00184 Eucalyptus grandis Eucgr.D00184 I 0.622
LDEC016573 Leptinotarsa decemlineata LDEC016573 N 0.621
Traes_2AL_AAEBFA9CC Triticum aestivum Traes_2AL_AAEBFA9CC N 0.619
ECPE_0000357901 Echinostoma caproni ECPE_0000357901 N 0.619
maker-nMf.1.1.scaf05303-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.8 N 0.619
Traes_1DS_AAEBFA9CC Triticum aestivum Traes_1DS_AAEBFA9CC N 0.619
TCNE_0000505101 Toxocara canis TCNE_0000505101 N 0.618
GPUH_0000797801 Gongylonema pulchrum GPUH_0000797801 N 0.618
EEL_0000533501 Elaeophora elaphi EEL_0000533501 N 0.618
hoxc12a Gasterosteus aculeatus ENSGACG00000009391 N 0.617
M437DRAFT_40473 Aureobasidium melanogenum M437DRAFT_40473 N 0.617
BGLB006778 Biomphalaria glabrata BGLB006778 N 0.617
HMX2 Felis catus ENSFCAG00000023440 N 0.616
Alligator_sinensis_CCG004967.1 Alligator sinensis Alligator_sinensis_CCG004967.1 N 0.616
ENSFCAG00000025984 Felis catus ENSFCAG00000025984 N 0.616
GSTUM_00004451001 Tuber melanosporum GSTUM_00004451001 I 0.616
ENSECAG00000002506 Equus caballus ENSECAG00000002506 I 0.616
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N 0.616
ENSCSAG00000006765 Chlorocebus sabaeus ENSCSAG00000006765 N 0.616
BTMF_0000546301 Brugia timori BTMF_0000546301 N 0.614
M378DRAFT_56764 Amanita muscaria M378DRAFT_56764 N 0.614
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.614
DME_0000044501 Dracunculus medinensis DME_0000044501 N 0.613
HNAJ_0000607701 Hymenolepis nana HNAJ_0000607701 N 0.613
NECAME_04746 Necator americanus NECAME_04746 N 0.613
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N 0.613
LOAG_07462 Loa loa LOAG_07462 N 0.612
ADIR006385 Anopheles dirus ADIR006385 N 0.612
NKX6-3 Homo sapiens ENSG00000165066 D 0.612
ENSACAG00000027662 Anolis carolinensis ENSACAG00000027662 I 0.612
ENSACAG00000000961 Anolis carolinensis ENSACAG00000000961 N 0.612
AMIN002696 Anopheles minimus AMIN002696 N 0.612
AMEM011598 Anopheles merus AMEM011598 N 0.612
AQUA009533 Anopheles quadriannulatus AQUA009533 N 0.612
ANCDUO_16102 Ancylostoma duodenale ANCDUO_16102 N 0.612
ENSOANG00000003475 Ornithorhynchus anatinus ENSOANG00000003475 I 0.612
ENSPANG00000014739 Papio anubis ENSPANG00000014739 N 0.612
SMRZ_0000903001 Schistosoma margrebowiei SMRZ_0000903001 N 0.612
ENSMMUG00000014725 Macaca mulatta ENSMMUG00000014725 N 0.612
ENSACAG00000005787 Anolis carolinensis ENSACAG00000005787 N 0.612
SROB_0001009601 Schistosoma rodhaini SROB_0001009601 N 0.612
ENSPCAG00000005898 Procavia capensis ENSPCAG00000005898 N 0.612
ENSPPYG00000018545 Pongo abelii ENSPPYG00000018545 N 0.612
ENSMEUG00000015794 Macropus eugenii ENSMEUG00000015794 I 0.612
ANCCAN_19464 Ancylostoma caninum ANCCAN_19464 N 0.612
AARA004444 Anopheles arabiensis AARA004444 N 0.612
NKX6-3 Tursiops truncatus ENSTTRG00000003567 N 0.612
CPIJ001378 Culex quinquefasciatus CPIJ001378 N 0.612
GRMZM2G381748 Zea mays GRMZM2G381748 N 0.612
CpipJ_CPIJ001378 Culex pipiens CpipJ_CPIJ001378 N 0.612
Cmyd_10012338 Chelonia mydas Cmyd_10012338 N 0.612
LCUP008695 Lucilia cuprina LCUP008695 N 0.612
Bm8478 Brugia malayi Bm8478 N 0.612
NKX6-3 Canis familiaris ENSCAFG00000005710 N 0.612
CJA40511 Caenorhabditis japonica CJA40511 I 0.612
PPA04715 Pristionchus pacificus PPA04715 N 0.612
CLEC002615 Cimex lectularius CLEC002615 N 0.612
AALB008451 Anopheles albimanus AALB008451 N 0.612
AATE009299 Anopheles atroparvus AATE009299 I 0.611
HOXB2 Pan troglodytes ENSPTRG00000009352 I 0.611
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.611
Tal_R008067 Tyto alba Tal_R008067 I 0.611
T265_14387 Opisthorchis viverrini T265_14387 N 0.611
F775_01938 Aegilops tauschii F775_01938 N 0.611
SCUD_0000383301 Schistosoma curassoni SCUD_0000383301 N 0.611
AMEM007254 Anopheles merus AMEM007254 N 0.611
SVUK_0001081801 Strongylus vulgaris SVUK_0001081801 N 0.610
ASIM_0000175201 Anisakis simplex ASIM_0000175201 N 0.610
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N 0.609
ISCW012461 Ixodes scapularis ISCW012461 N 0.609
LOAG_18696 Loa loa LOAG_18696 N 0.609
TLX2 Ochotona princeps ENSOPRG00000014031 N 0.609
nOo.2.0.1.g12002 Onchocerca ochengi nOo.2.0.1.g12002 N 0.609
HHAL004742-PA Halyomorpha halys HHAL004742-PA N 0.608
SMTD_0001153001 Schistosoma mattheei SMTD_0001153001 N 0.608
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N 0.608
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N 0.608
HPBE_0002651601 Heligmosomoides bakeri HPBE_0002651601 N 0.608
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N 0.608
NECAME_11765 Necator americanus NECAME_11765 N 0.608
ASIM_0000357501 Anisakis simplex ASIM_0000357501 N 0.608
KGM_15359 Danaus plexippus KGM_15359 N 0.608
NEMVEDRAFT_v1g101680 Nematostella vectensis NEMVEDRAFT_v1g101680 N 0.608
GH13586 Drosophila grimshawi FBgn0121062 N 0.608
WUBG_03180 Wuchereria bancrofti WUBG_03180 N 0.608
DICVIV_09128 Dictyocaulus viviparus DICVIV_09128 N 0.607
Cagra.1511s0010 Capsella grandiflora Cagra.1511s0010 N 0.607
GSMUA_Achr7G25990_001 Musa acuminata GSMUA_Achr7G25990_001 N 0.607
F775_05084 Aegilops tauschii F775_05084 N 0.606
A_05714 Schistosoma haematobium A_05714 N 0.606
NBR_0000086301 Nippostrongylus brasiliensis NBR_0000086301 N 0.606
LDEC004784 Leptinotarsa decemlineata LDEC004784 N 0.606
DICVIV_01479 Dictyocaulus viviparus DICVIV_01479 N 0.605
ENSTGUG00000000339 Taeniopygia guttata ENSTGUG00000000339 N 0.605
Alligator_sinensis_CCG010660.1 Alligator sinensis Alligator_sinensis_CCG010660.1 N 0.605
BGLB011885 Biomphalaria glabrata BGLB011885 N 0.605
SPAL_0000530600 Strongyloides papillosus SPAL_0000530600 N 0.605
ANCCAN_14745 Ancylostoma caninum ANCCAN_14745 N 0.605
TRE_0000162501 Trichobilharzia regenti TRE_0000162501 N 0.605
ENSSHAG00000011988 Sarcophilus harrisii ENSSHAG00000011988 I 0.604
ENSMGAG00000010685 Meleagris gallopavo ENSMGAG00000010685 I 0.603
GBX2 Oryzias latipes ENSORLG00000001376 I 0.603
Ogr19002 Ophisaurus gracilis Ogr19002 N 0.603
BGIBMGA003265 Bombyx mori BGIBMGA003265 N 0.603
PEQ_0000993201 Parascaris equorum PEQ_0000993201 N 0.603
ENSMLUG00000022220 Myotis lucifugus ENSMLUG00000022220 N 0.603
WUBG_09511 Wuchereria bancrofti WUBG_09511 N 0.603
HMEL016138 Heliconius melpomene HMEL016138 N 0.603
Ocbimv22010205m.g Octopus bimaculoides Ocbimv22010205m.g N 0.603
SPER_0001567701 Spirometra erinaceieuropaei SPER_0001567701 N 0.603
CGI_10026625 Crassostrea gigas CGI_10026625 N 0.603
SNAPOd2T00002147001 Oikopleura dioica SNAPOd2T00002147001 N 0.603
HHAL009617-PA Halyomorpha halys HHAL009617-PA N 0.603
DILT_0000613101 Diphyllobothrium latum DILT_0000613101 N 0.603
BGLB007768 Biomphalaria glabrata BGLB007768 N 0.603
LLOJ004702 Lutzomyia longipalpis LLOJ004702 N 0.602
NEUTE1DRAFT_119686 Neurospora tetrasperma NEUTE1DRAFT_119686 N 0.602
Tal_R004953 Tyto alba Tal_R004953 N 0.602
Smp_136900 Schistosoma mansoni Smp_136900 N 0.602
Minc14799 Meloidogyne incognita Minc14799 N 0.602
e_gw1.1.3681.1 Cryphonectria parasitica e_gw1.1.3681.1 N 0.602
BARX2 Ornithorhynchus anatinus ENSOANG00000000573 N 0.601
BGLB007714 Biomphalaria glabrata BGLB007714 N 0.601
SapurV1A.0059s0380 Salix purpurea SapurV1A.0059s0380 N 0.601
BGLB012524 Biomphalaria glabrata BGLB012524 N 0.600
DLX3 Loxodonta africana ENSLAFG00000028511 N 0.600
Cmyd_10005403 Chelonia mydas Cmyd_10005403 I 0.600
ENSXMAG00000013191 Xiphophorus maculatus ENSXMAG00000013191 N 0.600
ENSAMXG00000008007 Astyanax mexicanus ENSAMXG00000008007 I 0.600
BARX1 Homo sapiens ENSG00000131668 D 0.600
WUBG_18725 Wuchereria bancrofti WUBG_18725 N 0.600
ENSMGAG00000009298 Meleagris gallopavo ENSMGAG00000009298 N 0.600
Cla017350 Citrullus lanatus Cla017350 N 0.600
ACEP24283 Atta cephalotes ACEP24283 N 0.600
Alligator_sinensis_CCG001661.1 Alligator sinensis Alligator_sinensis_CCG001661.1 I 0.600
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N 0.600
ANCCAN_04049 Ancylostoma caninum ANCCAN_04049 I 0.599
ANCCEY_01003 Ancylostoma ceylanicum ANCCEY_01003 I 0.599
28307.m000017 Ricinus communis 28307.m000017 I 0.599