cassava18449.valid.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava18449.valid.m1 T227051_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18449.valid.m1 Homeodomain 277 333

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_038389 Theobroma cacao TCM_038389 N 0.822
29848.m004652 Ricinus communis 29848.m004652 N 0.800
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.777
Pm004594 Prunus mume Pm004594 N 0.753
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.753
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.751
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.751
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.745
MDP0000119866 Malus domestica MDP0000119866 N 0.729
MDP0000202143 Malus domestica MDP0000202143 N 0.717
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.705
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.689
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.689
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.684
PK00680.1 Cannabis sativa PK00680.1 N 0.676
OCP3 Arabidopsis thaliana AT5G11270 N 0.672
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.672
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.672
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.672
Cla021272 Citrullus lanatus Cla021272 N 0.668
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.668
Bra008975 Brassica rapa Bra008975 N 0.661
Bo9g171420 Brassica oleracea Bo9g171420 N 0.661
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.661
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.658
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.656
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.656
OB06G27850 Oryza brachyantha OB06G27850 N 0.643
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.638
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.628
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.626
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.625
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.625
mgf000632m Mimulus guttatus mgf000632m N 0.624
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.623
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.623
OBART06G20210 Oryza barthii OBART06G20210 N 0.623
OS06G0601000 Oryza sativa OS06G0601000 N 0.623
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.623
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.623
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.623
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.621
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.612
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.607