cassava43653.valid.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava43653.valid.m1 T227136_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN

NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.668 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava43653.valid.m1 Homeodomain 31 87

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

Invalid Input OrderBy

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action