Cucsa.395170 (Cucumis sativus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cucsa.395170 T227237_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.395170.1 Homeodomain 401 457
Cucsa.395170.2 Homeodomain 401 457
Cucsa.395170.3 Homeodomain 320 378

Links

Other Homeodomain family TFs
Other Cucumis sativus TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene02674-v1.0-hybrid Fragaria vesca gene02674-v1.0-hybrid N 0.867
Cla023019 Citrullus lanatus Cla023019 N 0.867
evm.TU.supercontig_78.15 Carica papaya evm.TU.supercontig_78.15 N 0.866
OBART11G03800 Oryza barthii OBART11G03800 I 0.843
LjSGA_061861.1 Lotus japonicus LjSGA_061861.1 I 0.834
GSMUA_Achr4G12180_001 Musa acuminata GSMUA_Achr4G12180_001 N 0.827
evm.TU.supercontig_195.45 Carica papaya evm.TU.supercontig_195.45 N 0.823
GRMZM2G161435 Zea mays GRMZM2G161435 I 0.812
OLONG_016371 Oryza longistaminata OLONG_016371 I 0.803
orange1.1g040555m.g Citrus sinensis orange1.1g040555m.g N 0.781
Ciclev10033544m.g Citrus clementina Ciclev10033544m.g N 0.781
PK17736.1 Cannabis sativa PK17736.1 N 0.779
POPTR_0002s03240 Populus trichocarpa POPTR_0002s03240 N 0.778
MTR_2g095050 Medicago truncatula MTR_2g095050 N 0.773
GSMUA_Achr4G02680_001 Musa acuminata GSMUA_Achr4G02680_001 N 0.770
SapurV1A.0006s0130 Salix purpurea SapurV1A.0006s0130 N 0.769
Lus10026432.g Linum usitatissimum Lus10026432.g N 0.737
Sb04g008030 Sorghum bicolor Sb04g008030 I 0.727
PDK_20s1614221g001 Phoenix dactylifera PDK_20s1614221g001 I 0.718
estExt_fgenesh2_pg.C_1150041 Physcomitrella patens estExt_fgenesh2_pg.C_1150041 N 0.706
Thhalv10002247m.g Eutrema salsugineum Thhalv10002247m.g N 0.695
OB12G13660 Oryza brachyantha OB12G13660 N 0.639
SELMODRAFT_48157 Selaginella moellendorffii SELMODRAFT_48157 N 0.632
SELMODRAFT_68227 Selaginella moellendorffii SELMODRAFT_68227 N 0.632
fgenesh1_pg.C_scaffold_12000117 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_12000117 I 0.607
PHACADRAFT_188701 Phanerochaete carnosa PHACADRAFT_188701 I 0.607
PHLGIDRAFT_38219 Phlebiopsis gigantea PHLGIDRAFT_38219 I 0.607
mgf001720m Mimulus guttatus mgf001720m I 0.603