e_gw.35.232.1 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 e_gw.35.232.1 T227294_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g80394
M02151_2.00
Nematostella vectensis
NNYWATNHN

NDNATWRNN
PBM
Weirauch et al.(2014)
pTH5904
0.636 0.456
Esx1
M00424_2.00
Mus musculus
NYTAATWR

YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.627 0.526
CG15696
M02125_2.00
Drosophila melanogaster
NNYWATHNN

NNDATWRNN
PBM
Weirauch et al.(2014)
pTH6445
0.616 0.439
CG15696
M06540_2.00
Drosophila melanogaster
TTRATTR

YAATYAA
B1H
Mathelier et al.(2014)
MA0176.1
0.616 0.439
CG15696
M06356_2.00
Drosophila melanogaster
BTTRATTR

YAATYAAV
B1H
Zhu et al.(2011)
CG15696_Cell_FBgn0038833
0.616 0.439
CG15696
M06357_2.00
Drosophila melanogaster
NHTWATTR

YAATWADN
B1H
Zhu et al.(2011)
CG15696_SOLEXA_FBgn0038833
0.616 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.35.232.1 Homeodomain 1 57

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

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28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action