e_gw.549.21.1 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 e_gw.549.21.1 T227314_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
eve
M00556_2.00
Drosophila melanogaster
NNTAATTARN

NYTAATTANN
PBM
Busser et al.(2012a)
Eve
0.605 0.860
eve
M02115_2.00
Drosophila melanogaster
NTAATNDNN

NNHNATTAN
PBM
Weirauch et al.(2014)
pTH6436
0.605 0.860
eve
M03794_2.00
Drosophila melanogaster
VYTAATKASN

NSTMATTARB
SELEX
Nitta et al.(2015)
eve_1
0.605 0.860
eve
M06486_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0221.1
0.605 0.860
eve
M06240_2.00
Drosophila melanogaster
DYTAATKA

TMATTARH
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
0.605 0.860
eve
M06241_2.00
Drosophila melanogaster
HKBTAAYNDTKY

RMAHNRTTAVMD
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
0.605 0.860
eve
M06242_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
0.605 0.860
eve
M09678_2.00
Drosophila melanogaster
NKHTAATKD

HMATTADMN
Misc
Kulakovskiy et al.(2009)
eve
0.605 0.860
eve
M10786_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EVE_Q6
0.605 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.549.21.1 Homeodomain 2 51

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g03166 Acanthocheilonema viteae nAv.1.0.1.g03166 I 0.644
AAEL007369 Aedes aegypti AAEL007369 I 0.606
Alligator_sinensis_CCG007467.1 Alligator sinensis Alligator_sinensis_CCG007467.1 I 0.669
ANCCEY_05038 Ancylostoma ceylanicum ANCCEY_05038 I 0.695
ANCDUO_02875 Ancylostoma duodenale ANCDUO_02875 I 0.664
ANCDUO_14705 Ancylostoma duodenale ANCDUO_14705 I 0.695
ACAC_0000394201 Angiostrongylus cantonensis ACAC_0000394201 I 0.685
ASIM_0001653501 Anisakis simplex ASIM_0001653501 I 0.685
ASIM_0000400001 Anisakis simplex ASIM_0000400001 I 0.685
ASIM_0001502101 Anisakis simplex ASIM_0001502101 I 0.623
AALB002934 Anopheles albimanus AALB002934 I 0.606
AARA006634 Anopheles arabiensis AARA006634 I 0.640
AARA007205 Anopheles arabiensis AARA007205 I 0.606
AATE002315 Anopheles atroparvus AATE002315 I 0.606
ACHR010176 Anopheles christyi ACHR010176 N 0.676
ACHR003168 Anopheles christyi ACHR003168 I 0.606
ACOM022636 Anopheles coluzzii ACOM022636 I 0.606
ACOM028612 Anopheles coluzzii ACOM028612 I 0.640
ACOM034313 Anopheles coluzzii ACOM034313 I 0.690
ACUA028387 Anopheles culicifacies ACUA028387 I 0.667
ACUA014477 Anopheles culicifacies ACUA014477 I 0.606
ADIR004092 Anopheles dirus ADIR004092 I 0.606
AEPI008972 Anopheles epiroticus AEPI008972 I 0.606
AFAF012901 Anopheles farauti AFAF012901 I 0.606
AFUN003165 Anopheles funestus AFUN003165 I 0.606
AGAP003574 Anopheles gambiae AGAP003574 I 0.640
AGAP010279 Anopheles gambiae AGAP010279 I 0.606
AMAM005451 Anopheles maculatus AMAM005451 I 0.606
AMEC003288 Anopheles melas AMEC003288 N 0.659
AMEC018849 Anopheles melas AMEC018849 I 0.606
AMEM013622 Anopheles merus AMEM013622 I 0.606
AMIN001113 Anopheles minimus AMIN001113 I 0.606
AQUA001638 Anopheles quadriannulatus AQUA001638 I 0.640
AQUA006089 Anopheles quadriannulatus AQUA006089 I 0.606
ASIS007201 Anopheles sinensis ASIS007201 I 0.606
ASIS004766 Anopheles sinensis ASIS004766 I 0.667
ASIS018158 Anopheles sinensis ASIS018158 N 0.632
ASTEI09848 Anopheles stephensi ASTEI09848 I 0.606
GB49029 Apis mellifera GB49029 I 0.606
Afo_R001648 Aptenodytes forsteri Afo_R001648 I 0.671
ALUE_0001238401 Ascaris lumbricoides ALUE_0001238401 I 0.623
ALUE_0001765001 Ascaris lumbricoides ALUE_0001765001 I 0.663
ACEP17614 Atta cephalotes ACEP17614 I 0.608
BGLB003458 Biomphalaria glabrata BGLB003458 I 0.687
BGIBMGA010035 Bombyx mori BGIBMGA010035 N 0.618
MEOX1 Bos taurus ENSBTAG00000015751 I 0.711
estExt_fgenesh2_kg.C_2600002 Branchiostoma floridae estExt_fgenesh2_kg.C_2600002 I 0.610
BTMF_0000584401 Brugia timori BTMF_0000584401 I 0.644
Aan_R000875 Calypte anna Aan_R000875 I 0.669
Cflo_10805--XP_001120749.1_APIME Camponotus floridanus Cflo_10805--XP_001120749.1_APIME I 0.608
CapteG30874 Capitella teleta CapteG30874 I 0.669
CapteG71005 Capitella teleta CapteG71005 N 0.611
Cmyd_10002827 Chelonia mydas Cmyd_10002827 N 0.690
CLEC007879 Cimex lectularius CLEC007879 I 0.667
CLEC000966 Cimex lectularius CLEC000966 N 0.640
CLEC004158 Cimex lectularius CLEC004158 I 0.603
ENSCING00000017406 Ciona intestinalis ENSCING00000017406 I 0.611
ENSCSAVG00000008736 Ciona savignyi ENSCSAVG00000008736 I 0.607
CGI_10009942 Crassostrea gigas CGI_10009942 I 0.669
CGI_10013056 Crassostrea gigas CGI_10013056 I 0.600
CpipJ_CPIJ013533 Culex pipiens CpipJ_CPIJ013533 I 0.606
CPIJ013533 Culex quinquefasciatus CPIJ013533 I 0.606
CGOC_0000550601 Cylicostephanus goldi CGOC_0000550601 I 0.685
KGM_21124 Danaus plexippus KGM_21124 I 0.603
DAPPUDRAFT_347542 Daphnia pulex DAPPUDRAFT_347542 I 0.603
DAPPUDRAFT_55144 Daphnia pulex DAPPUDRAFT_55144 I 0.667
PDX1 Dasypus novemcinctus ENSDNOG00000003213 I 0.710
DILT_0000923301 Diphyllobothrium latum DILT_0000923301 I 0.705
DME_0001008101 Dracunculus medinensis DME_0001008101 I 0.685
DME_0000365001 Dracunculus medinensis DME_0000365001 I 0.666
GF11297 Drosophila ananassae FBgn0088337 I 0.606
eve Drosophila erecta FBgn0024802 I 0.605
eve Drosophila grimshawi FBgn0015087 I 0.605
eve Drosophila melanogaster FBgn0000606 D 0.605
GI20020 Drosophila mojavensis FBgn0142756 I 0.606
GL16768 Drosophila persimilis FBgn0154372 I 0.605
eve Drosophila pseudoobscura FBgn0020474 I 0.605
GM21172 Drosophila sechellia FBgn0176053 I 0.605
eve Drosophila virilis FBgn0040404 I 0.606
eve Drosophila willistoni FBgn0064268 I 0.606
eve Drosophila yakuba FBgn0024766 I 0.605
EEL_0000392901 Elaeophora elaphi EEL_0000392901 I 0.685
EVEC_0000662001 Enterobius vermicularis EVEC_0000662001 I 0.695
BARHL1 Felis catus ENSFCAG00000007105 I 0.671
ENSGMOG00000011340 Gadus morhua ENSGMOG00000011340 N 0.666
ENSGMOG00000006424 Gadus morhua ENSGMOG00000006424 I 0.675
ENSGMOG00000015411 Gadus morhua ENSGMOG00000015411 I 0.711
ENSGACG00000020715 Gasterosteus aculeatus ENSGACG00000020715 I 0.675
GPUH_0000001901 Gongylonema pulchrum GPUH_0000001901 I 0.664
GPUH_0002067401 Gongylonema pulchrum GPUH_0002067401 I 0.695
ENSGGOG00000027271 Gorilla gorilla ENSGGOG00000027271 I 0.657
ALX1 Gorilla gorilla ENSGGOG00000000168 I 0.674
HHAL000607-PA Halyomorpha halys HHAL000607-PA I 0.603
HMEL011193 Heliconius melpomene HMEL011193 I 0.603
HelroG109728 Helobdella robusta HelroG109728 I 0.603
Hba_17613 Heterorhabditis bacteriophora Hba_17613 I 0.621
MNX1 Homo sapiens ENSG00000130675 D 0.645
ISCW024267 Ixodes scapularis ISCW024267 I 0.713
nLs.2.1.2.g00296 Litomosoides sigmodontis nLs.2.1.2.g00296 I 0.685
LOAG_02387 Loa loa LOAG_02387 I 0.664
LOAG_17577 Loa loa LOAG_17577 N 0.627
LotgiG120200 Lottia gigantea LotgiG120200 I 0.669
LCUP002254 Lucilia cuprina LCUP002254 N 0.665
LCUP005140 Lucilia cuprina LCUP005140 I 0.604
LLOJ004353 Lutzomyia longipalpis LLOJ004353 I 0.667
MESCA003890 Megaselia scalaris MESCA003890 I 0.669
MESCA010857 Megaselia scalaris MESCA010857 I 0.604
MESCA011262 Megaselia scalaris MESCA011262 I 0.667
ENSMGAG00000015339 Meleagris gallopavo ENSMGAG00000015339 I 0.716
ENSMGAG00000006701 Meleagris gallopavo ENSMGAG00000006701 I 0.669
MCINX000309 Melitaea cinxia MCINX000309 I 0.625
augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0 I 0.646
maker-nMf.1.1.scaf04426-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf04426-augustus-gene-0.4 I 0.609
maker-nMf.1.1.scaf00145-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00145-augustus-gene-0.13 I 0.688
Minc03173 Meloidogyne incognita Minc03173 I 0.609
BARHL2 Monodelphis domestica ENSMODG00000012056 I 0.669
MDOA013017 Musca domestica MDOA013017 I 0.606
ENSMPUG00000006459 Mustela putorius furo ENSMPUG00000006459 I 0.682
NECAME_15973 Necator americanus NECAME_15973 I 0.685
NEMVEDRAFT_v1g49015 Nematostella vectensis NEMVEDRAFT_v1g49015 I 0.672
NEMVEDRAFT_v1g48953 Nematostella vectensis NEMVEDRAFT_v1g48953 I 0.672
NEMVEDRAFT_v1g93991 Nematostella vectensis NEMVEDRAFT_v1g93991 I 0.656
NBR_0000568501 Nippostrongylus brasiliensis NBR_0000568501 I 0.675
OFLC_0001568801 Onchocerca flexuosa OFLC_0001568801 I 0.612
OFLC_0000069201 Onchocerca flexuosa OFLC_0000069201 I 0.695
nOo.2.0.1.g00955 Onchocerca ochengi nOo.2.0.1.g00955 I 0.685
nOo.2.0.1.g01207 Onchocerca ochengi nOo.2.0.1.g01207 I 0.664
WBGene00245266 Onchocerca volvulus WBGene00245266 I 0.695
WBGene00242173 Onchocerca volvulus WBGene00242173 I 0.664
ENSORLG00000012370 Oryzias latipes ENSORLG00000012370 I 0.671
ENSOARG00000018096 Ovis aries ENSOARG00000018096 I 0.657
NKX1-1 Pan troglodytes ENSPTRG00000041220 I 0.720
ENSPANG00000025837 Papio anubis ENSPANG00000025837 I 0.620
PEQ_0001172001 Parascaris equorum PEQ_0001172001 I 0.644
PEQ_0000367601 Parascaris equorum PEQ_0000367601 I 0.675
PEQ_0000070601 Parascaris equorum PEQ_0000070601 N 0.614
PEQ_0000006101 Parascaris equorum PEQ_0000006101 N 0.647
PHUM236390 Pediculus humanus PHUM236390 I 0.606
ENSPFOG00000017586 Poecilia formosa ENSPFOG00000017586 I 0.671
ENSPFOG00000024523 Poecilia formosa ENSPFOG00000024523 I 0.663
HOXC4 Procavia capensis ENSPCAG00000011039 I 0.649
PXEA_0001255201 Protopolystoma xenopodis PXEA_0001255201 I 0.663
PXEA_0002510601 Protopolystoma xenopodis PXEA_0002510601 I 0.667
PXEA_0001895501 Protopolystoma xenopodis PXEA_0001895501 I 0.728
OTP Pteropus vampyrus ENSPVAG00000011630 I 0.660
nRc.2.0.1.g34717 Romanomermis culicivorax nRc.2.0.1.g34717 I 0.718
Sakowv30043910m.g Saccoglossus kowalevskii Sakowv30043910m.g I 0.669
SCUD_0000812901 Schistosoma curassoni SCUD_0000812901 I 0.663
SCUD_0001719701 Schistosoma curassoni SCUD_0001719701 I 0.624
C_01032 Schistosoma haematobium C_01032 I 0.716
C_01031 Schistosoma haematobium C_01031 I 0.716
Smp_125600 Schistosoma mansoni Smp_125600 I 0.669
Smp_165410 Schistosoma mansoni Smp_165410 I 0.624
Smp_189380 Schistosoma mansoni Smp_189380 I 0.716
SMTD_0002280601 Schistosoma mattheei SMTD_0002280601 I 0.716
SROB_0001108301 Schistosoma rodhaini SROB_0001108301 I 0.716
SINV18014 Solenopsis invicta SINV18014 I 0.667
L893_g26530 Steinernema glaseri L893_g26530 I 0.650
TASK_0000431401 Taenia asiatica TASK_0000431401 I 0.667
TsM_000296500 Taenia solium TsM_000296500 I 0.667
ENSTSYG00000012674 Tarsius syrichta ENSTSYG00000012674 I 0.671
TELCIR_07155 Teladorsagia circumcincta TELCIR_07155 I 0.685
tetur14g02380 Tetranychus urticae tetur14g02380 I 0.666
TCLT_0000305201 Thelazia callipaeda TCLT_0000305201 I 0.675
TCLT_0000599001 Thelazia callipaeda TCLT_0000599001 I 0.695
TCNE_0001765901 Toxocara canis TCNE_0001765901 I 0.685
TC009469 Tribolium castaneum TC009469 I 0.605
TRE_0000860801 Trichobilharzia regenti TRE_0000860801 I 0.667
TriadG9178 Trichoplax adhaerens TriadG9178 N 0.638
BARHL2 Vicugna pacos ENSVPAG00000005913 I 0.669
WUBG_03794 Wuchereria bancrofti WUBG_03794 N 0.728
WUBG_01783 Wuchereria bancrofti WUBG_01783 I 0.664
WUBG_02861 Wuchereria bancrofti WUBG_02861 I 0.685
L798_13588 Zootermopsis nevadensis L798_13588 I 0.605