e_gw.97.193.1 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 e_gw.97.193.1 T227334_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG08197
M02064_2.00
Caenorhabditis briggsae
NNDACDNN

NNHGTHNN
PBM
Weirauch et al.(2014)
pTH6408
0.690 0.571
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.97.193.1 Homeodomain 3 61

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBG08197 Caenorhabditis briggsae CBG08197 D 0.690
CBN07279 Caenorhabditis brenneri CBN07279 I 0.692
CBN12980 Caenorhabditis brenneri CBN12980 I 0.692
CJA00344 Caenorhabditis japonica CJA00344 I 0.690
CRE09644 Caenorhabditis remanei CRE09644 I 0.702
ENSGMOG00000011698 Gadus morhua ENSGMOG00000011698 I 0.755
irx-1 Caenorhabditis elegans WBGene00007984 I 0.690
MBM_02986 Marssonina brunnea MBM_02986 N 0.617
SNAPOd2T00027338001 Oikopleura dioica SNAPOd2T00027338001 I 0.620