estExt_fgenesh1_pg.C_50124 (Cochliobolus heterostrophus C5)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgenesh1_pg.C_50124 T227343_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU09556
M02226_2.00 		Neurospora crassa
TTAATWTA
TAWATTAA		 PBM
Weirauch et al.(2014)
pTH8955 		0.840 0.912
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00 		PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN		 PBM
Weirauch et al.(2014)
pTH6773 		0.802 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_50124 Homeodomain 126 183

Links

Other Homeodomain family TFs
Other Cochliobolus heterostrophus C5 TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.000
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.000
BRADI4G43680 Brachypodium distachyon BRADI4G43680 N 0.000
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.000
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.000
F775_08186 Aegilops tauschii F775_08186 N 0.000
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.000
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.000
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.000
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.000
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.000
MLOC_73193 Hordeum vulgare MLOC_73193 N 0.000
OB03G37330 Oryza brachyantha OB03G37330 N 0.000
OBART03G30260 Oryza barthii OBART03G30260 N 0.000
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.000
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.000
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.000
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.000
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.000
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.000
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.000
ORUFI03G31480 Oryza rufipogon ORUFI03G31480 N 0.000
OS03G0690600 Oryza sativa OS03G0690600 N 0.000
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.000
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.000
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.000
Pm002685 Prunus mume Pm002685 N 0.000
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.000
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.000
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.000
Si034417m.g Setaria italica Si034417m.g N 0.000
TCM_021920 Theobroma cacao TCM_021920 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_5BL_C8BEC527F Triticum aestivum Traes_5BL_C8BEC527F N 0.000
Traes_5DL_8FD0CF6B9 Triticum aestivum Traes_5DL_8FD0CF6B9 N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.000