estExt_fgenesh1_pg.C_60239 (Cochliobolus heterostrophus C5)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgenesh1_pg.C_60239 T227344_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.626 0.268
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.626 0.268
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.626 0.268
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.626 0.268
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_60239 Homeodomain 22 48
estExt_fgenesh1_pg.C_60239 Homeodomain 46 59

Links

Other Homeodomain family TFs
Other Cochliobolus heterostrophus C5 TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HESX1 Homo sapiens ENSG00000163666 D 0.626
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.633
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.620
Eucgr.H02817 Eucalyptus grandis Eucgr.H02817 I 0.640
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.622
Aan_R011917 Calypte anna Aan_R011917 I 0.626
PGSC0003DMG400021423 Solanum tuberosum PGSC0003DMG400021423 I 0.600
OPUNC09G10660 Oryza punctata OPUNC09G10660 I 0.606
MCINX007054 Melitaea cinxia MCINX007054 I 0.665
OMERI08G14040 Oryza meridionalis OMERI08G14040 I 0.606
MCINX008871 Melitaea cinxia MCINX008871 I 0.633
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.634
COCC4DRAFT_69376 Bipolaris maydis COCC4DRAFT_69376 I 0.867
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.626
ONIVA08G19230 Oryza nivara ONIVA08G19230 N 0.610
TRIUR3_27997 Triticum urartu TRIUR3_27997 N 0.605
SNOG_06729 Phaeosphaeria nodorum SNOG_06729 N 0.783
SNOG_06729 Stagonospora nodorum SNOG_06729 N 0.793