estExt_fgenesh1_pg.C_60239 (Cochliobolus heterostrophus C5)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgenesh1_pg.C_60239 T227344_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.626 0.268
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.626 0.268
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.626 0.268
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.626 0.268
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_60239 Homeodomain 22 48
estExt_fgenesh1_pg.C_60239 Homeodomain 46 59

Links

Other Homeodomain family TFs
Other Cochliobolus heterostrophus C5 TFs

Invalid Input OrderBy

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action