CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshDP_kg.C_480003
(
Dictyostelium purpureum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
estExt_fgeneshDP_kg.C_480003
T227405_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hbx5-1
M02069_2.00
Dictyostelium discoideum
WTGATTGR
YCAATCAW
PBM
Weirauch et al.(2014)
pTH5548
0.739
0.667
hbx5-2
M02070_2.00
Dictyostelium discoideum
WTGATTRV
BYAATCAW
PBM
Weirauch et al.(2014)
pTH5523
0.739
0.667
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshDP_kg.C_480003
Homeodomain
356
416
SRRKNRFNELQVKRLNDFFESLDKNGSKHSSDDIALLSGELGLTEQQVRVYFQNKRARSRP
Links
Other
Homeodomain
family TFs
Other
Dictyostelium purpureum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy