est_orfs.8_8268_4271518:3 (Micromonas pusilla)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 est_orfs.8_8268_4271518:3 T227447_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.733 0.649
KNAT6
M02037_2.00 		Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN		 PBM
Weirauch et al.(2014)
pTH7296 		0.721 0.649
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.689 0.614
GRMZM2G135447
M02139_2.00 		Zea mays
DTGACRKS
SMYGTCAH		 PBM
Weirauch et al.(2014)
pTH6328 		0.689 0.614
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.608 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
est_orfs.8_8268_4271518:3 Homeodomain 243 302

Links

Other Homeodomain family TFs
Other Micromonas pusilla TFs

Invalid Input OrderBy

326 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action