fgenesh1_pm.sca_3_chr4_2_0000293 (Nectria haematococca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgenesh1_pm.sca_3_chr4_2_0000293 T227490_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03070
M02223_2.00 		Neurospora crassa
NNHAYNDNN
NNHNRTDNN		 PBM
Weirauch et al.(2014)
pTH9699 		0.698 0.667
NCU03070
M02222_2.00 		Neurospora crassa
NNYCAATAWW
WWTATTGRNN		 PBM
Weirauch et al.(2014)
pTH5859 		0.666 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_3_chr4_2_0000293 Homeodomain 62 118

Links

Other Homeodomain family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action