fgenesh2_pg.scaffold_23000011 (Monosiga brevicollis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgenesh2_pg.scaffold_23000011 T227525_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG24578
M02065_2.00
Caenorhabditis briggsae
NNNTGACAKSTN

NASMTGTCANNN
PBM
Weirauch et al.(2014)
pTH6524
0.646 0.455
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_23000011 Homeodomain 420 477

Links

Other Homeodomain family TFs
Other Monosiga brevicollis TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L893_g8903 Steinernema glaseri L893_g8903 I 0.646
L892_g28686 Steinernema scapterisci L892_g28686 I 0.646
PTRK_0001375800 Parastrongyloides trichosuri PTRK_0001375800 I 0.646
SPAL_0001594500 Strongyloides papillosus SPAL_0001594500 I 0.646
SSTP_0001175600 Strongyloides stercoralis SSTP_0001175600 I 0.646
L596_g16822 Steinernema carpocapsae L596_g16822 I 0.646
CBG24578 Caenorhabditis briggsae CBG24578 D 0.646
CRE18960 Caenorhabditis remanei CRE18960 I 0.646
CJA02489 Caenorhabditis japonica CJA02489 I 0.646
unc-62 Caenorhabditis elegans WBGene00006796 D 0.646
XP_002647234.1 Caenorhabditis briggsae XP_002647234.1 I 0.646
ASU_10550 Ascaris suum ASU_10550 I 0.646
SVE_0999800 Strongyloides venezuelensis SVE_0999800 I 0.646
GPLIN_000275800 Globodera pallida GPLIN_000275800 I 0.614