CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

fgenesh2_pg.scaffold_5000057 *(Branchiostoma floridae)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	fgenesh2_pg.scaffold_5000057	T227539_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
VENTX M02091_2.00	Homo sapiens	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH5490	0.714	0.526
VENTX M00305_2.00	Homo sapiens	DTAATTRR	YYAATTAH	PBM Barrera et al.(2016) VENTX_REF	0.714	0.526
VENTX M03169_2.00	Homo sapiens	YTAATBGNT	ANCVATTAR	SELEX Jolma et al.(2013) VENTX_1	0.714	0.526
VENTX M03170_2.00	Homo sapiens	VSYTAATSGRWAAMCGATTAG	CTAATCGKTTWYCSATTARSB	SELEX Jolma et al.(2013) VENTX_2	0.714	0.526
VENTX M05188_2.00	Homo sapiens	CGHTAATBG	CVATTADCG	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_1	0.714	0.526
VENTX M05189_2.00	Homo sapiens	VNTAATBRNN	NNYVATTANB	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_2	0.714	0.526
VENTX M00303_2.00	Homo sapiens	NVTAATTANNN	NNNTAATTABN	PBM Barrera et al.(2016) VENTX_E101K	0.714	0.526
VENTX M05190_2.00	Homo sapiens	VHTAATKRNN	NNYMATTADB	SELEX Yin et al.(2017) VENTX_FL_Methyl-HT-SELEX	0.714	0.526
VENTX M00304_2.00	Homo sapiens	NATAYATAB	VTATRTATN	PBM Barrera et al.(2016) VENTX_R143C	0.714	0.509
MEOX2 M03103_2.00	Homo sapiens	NNTRATKASN	NSTMATYANN	SELEX Jolma et al.(2013) MEOX2_1	0.694	0.526
MEOX2 M03104_2.00	Homo sapiens	NTAATTANVNTAATTAV	BTAATTANBNTAATTAN	SELEX Jolma et al.(2013) MEOX2_2	0.694	0.526
MEOX2 M03105_2.00	Homo sapiens	HTAATGATGATKAN	NTMATCATCATTAD	SELEX Jolma et al.(2013) MEOX2_3	0.694	0.526
Meox2 M03271_2.00	Mus musculus	NTAATKAN	NTMATTAN	SELEX Jolma et al.(2013) Meox2_1	0.694	0.526
MEOX2 M04988_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_1	0.694	0.526
MEOX2 M04989_2.00	Homo sapiens	NTVATBRV	BYVATBAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_2	0.694	0.526
Meox2 M10771_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MEOX2_05	0.694	0.526
MEOX2 M04990_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_1	0.694	0.526
MEOX2 M04991_2.00	Homo sapiens	NTVATKRN	NYMATBAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_2	0.694	0.526
Meox1 M00384_2.00	Mus musculus	NTRATKRNN	NNYMATYAN	PBM Berger et al.(2008) Meox1_2310	0.694	0.509
MEOX1 M03077_2.00	Homo sapiens	NNTAATTASN	NSTAATTANN	SELEX Jolma et al.(2013) MEOX1_1	0.694	0.509
MEOX1 M04901_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_1	0.694	0.509
MEOX1 M04902_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_2	0.694	0.509
MEOX1 M04903_2.00	Homo sapiens	NTAAYGWB	VWCRTTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_1	0.694	0.509
MEOX1 M04904_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_2	0.694	0.509
Hoxa4 M00383_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Hoxa4_3426	0.684	0.491
HOXA4 M05381_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXA4_eDBD_HT-SELEX	0.684	0.491
HOXA4 M10755_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA4_Q2	0.684	0.491
HOXA4 M05382_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA4_eDBD_Methyl-HT-SELEX	0.684	0.491
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.684	0.474
Hoxb4 M00479_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxb4_2627	0.684	0.474
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.684	0.474
HOXB4 M05343_2.00	Homo sapiens	YTAATKAY	RTMATTAR	SELEX Yin et al.(2017) HOXB4_FL_HT-SELEX	0.684	0.474
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.684	0.474
HOXD4 M05273_2.00	Homo sapiens	NTMATKRV	BYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_HT-SELEX	0.684	0.474
HOXD4 M05276_2.00	Homo sapiens	NTAATKRB	VYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_HT-SELEX	0.684	0.474
HOXB4 M09162_2.00	Homo sapiens	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_HUMAN.H11MO.0.B	0.684	0.474
Hoxb4 M09204_2.00	Mus musculus	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_MOUSE.H11MO.0.A	0.684	0.474
Hoxb4 M09576_2.00	Mus musculus	TGATDRATKRSN	NSYMATYHATCA	Misc Heinz et al.(2010) ES-Hoxb4_GSE34014	0.684	0.474
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.684	0.474
HOXC4 M00329_2.00	Homo sapiens	NTAATKRNN	NNYMATTAN	PBM Barrera et al.(2016) HOXC4_R158L	0.684	0.474
HOXB4 M05344_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_1	0.684	0.474
HOXB4 M05345_2.00	Homo sapiens	HTAAYKAB	VTMRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_2	0.684	0.474
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.684	0.474
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.684	0.474
HOXD4 M05274_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_1	0.684	0.474
HOXD4 M05275_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_2	0.684	0.474
HOXD4 M05277_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_1	0.684	0.474
HOXD4 M05278_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_2	0.684	0.474
btn M03832_2.00	Drosophila melanogaster	NNTAATKANB	VNTMATTANN	SELEX Nitta et al.(2015) btn_1	0.678	0.526
btn M03833_2.00	Drosophila melanogaster	VNTAATKABN	NVTMATTANB	SELEX Nitta et al.(2015) btn_2	0.678	0.526
btn M06515_2.00	Drosophila melanogaster	DTAATKA	TMATTAH	B1H Mathelier et al.(2014) MA0215.1	0.678	0.526
btn M06307_2.00	Drosophila melanogaster	NDTAATKA	TMATTAHN	B1H Zhu et al.(2011) Btn_Cell_FBgn0014949	0.678	0.526
btn M06308_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) Btn_SOLEXA_FBgn0014949	0.678	0.526
ventx1.1.L M02234_2.00	Xenopus laevis	NNNNVBNNNN	NNNNVBNNNN	PBM Weirauch et al.(2014) pTH6162	0.678	0.544
ventx1.2.S M10805_2.00	Xenopus laevis	RSRMAAATWBBVS	SBBBWATTTKYSY	Transfac Matys et al.(2006) V$XVENT1_01	0.678	0.544
C15 M06505_2.00	Drosophila melanogaster	TTAAWKR	YMWTTAA	B1H Mathelier et al.(2014) MA0170.1	0.677	0.632
C15 M06289_2.00	Drosophila melanogaster	BTTAAWKR	YMWTTAAV	B1H Zhu et al.(2011) C15_Cell_FBgn0004863	0.677	0.632
C15 M06290_2.00	Drosophila melanogaster	NWTAAWKR	YMWTTAWN	B1H Zhu et al.(2011) C15_SOLEXA_FBgn0004863	0.677	0.632
TLX2 M02087_2.00	Homo sapiens	NYRDNNNNNN	NNNNNNHYRN	PBM Weirauch et al.(2014) pTH6482	0.677	0.614
Tlx2 M00526_2.00	Mus musculus	WTTAAWTA	TAWTTAAW	PBM Berger et al.(2008) Tlx2_3498	0.677	0.614
TLX2 M05020_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) TLX2_eDBD_HT-SELEX	0.677	0.614
TLX2 M10672_2.00	Homo sapiens	BNGTAAKDNB	VNHMTTACNV	Transfac Matys et al.(2006) V$NCX_01	0.677	0.614
TLX2 M05021_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) TLX2_eDBD_Methyl-HT-SELEX	0.677	0.614
lin-39 M08211_2.00	Caenorhabditis elegans	GATTGATG	CATCAATC	ChIP-seq Contrino et al.(2012) Mw154	0.677	0.526
lin-39 M09582_2.00	Caenorhabditis elegans	DTGATWRATK	MATYWATCAH	Misc Heinz et al.(2010) cElegans.L3-LIN39_modEncode	0.677	0.526
bsh M02113_2.00	Drosophila melanogaster	NNTAAYBDNN	NNHVRTTANN	PBM Weirauch et al.(2014) pTH6569	0.676	0.614
bsh M03786_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) bsh_1	0.676	0.614
bsh M03787_2.00	Drosophila melanogaster	TAATTRVWTAATKR	YMATTAWBYAATTA	SELEX Nitta et al.(2015) bsh_2	0.676	0.614
bsh M03788_2.00	Drosophila melanogaster	NTAATBRN	NYVATTAN	SELEX Nitta et al.(2015) bsh_3	0.676	0.614
bsh M06483_2.00	Drosophila melanogaster	YTAATBR	YVATTAR	B1H Mathelier et al.(2014) MA0214.1	0.676	0.614
bsh M06231_2.00	Drosophila melanogaster	HYTAATBRV	BYVATTARD	B1H Zhu et al.(2011) Bsh_Cell_FBgn0000529	0.676	0.614
bsh M06232_2.00	Drosophila melanogaster	NTAATKR	YMATTAN	B1H Zhu et al.(2011) Bsh_SOLEXA_FBgn0000529	0.676	0.614
Bsx M00516_2.00	Mus musculus	NTAAYBDNN	NNHVRTTAN	PBM Berger et al.(2008) Bsx_3483	0.674	0.596
BSX M03235_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BSX_1	0.674	0.596
BSX M05377_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_1	0.674	0.596
BSX M05378_2.00	Homo sapiens	BTAATBRV	BYVATTAV	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_2	0.674	0.596
BSX M05379_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_1	0.674	0.596
BSX M05380_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_2	0.674	0.596
Nanog M02098_2.00	Mus musculus	NHDAYNDNN	NNHNRTHDN	PBM Weirauch et al.(2014) pTH5685	0.673	0.526
NANOG M05015_2.00	Homo sapiens	NYRABBVB	VBVVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_HT-SELEX	0.673	0.526
NANOG M09139_2.00	Homo sapiens	NTYWRCATNWSAAWRVN	NBYWTTSWNATGYWRAN	Misc Kulakovskiy et al.(2013) NANOG_HUMAN.H11MO.0.A	0.673	0.526
Nanog M09176_2.00	Mus musculus	HTYWRMAWNWSAAWRVV	BBYWTTSWNWTKYWRAD	Misc Kulakovskiy et al.(2013) NANOG_MOUSE.H11MO.0.A	0.673	0.526
Nanog M09565_2.00	Mus musculus	BYTRATKGSY	RSCMATYARV	Misc Heinz et al.(2010) mES-Nanog_GSE11724	0.673	0.526
NANOG M10664_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_01	0.673	0.526
NANOG M10665_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_02	0.673	0.526
NANOG M10666_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_05	0.673	0.526
NANOG M10667_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_07	0.673	0.526
NANOG M10668_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q3	0.673	0.526
NANOG M10669_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q6	0.673	0.526
NANOG M05016_2.00	Homo sapiens	NHAAYGH	DCRTTDN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_1	0.673	0.526
NANOG M05017_2.00	Homo sapiens	NYRABKRN	NYMVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_2	0.673	0.526
Hmx2 M00507_2.00	Mus musculus	NHRANYGNNN	NNNCRNTYDN	PBM Berger et al.(2008) Hmx2_3424	0.672	0.579
HMX2 M03234_2.00	Homo sapiens	NNTTAAKTGNN	NNCAMTTAANN	SELEX Jolma et al.(2013) HMX2_1	0.672	0.579
HMX2 M05373_2.00	Homo sapiens	GNHRAKYGS	SCRMTYDNC	SELEX Yin et al.(2017) HMX2_eDBD_HT-SELEX	0.672	0.579
HMX2 M05375_2.00	Homo sapiens	NTTAAKTGNN	NNCAMTTAAN	SELEX Yin et al.(2017) HMX2_FL_HT-SELEX	0.672	0.579
HMX2 M05374_2.00	Homo sapiens	NNTAAKTGN	NCAMTTANN	SELEX Yin et al.(2017) HMX2_eDBD_Methyl-HT-SELEX	0.672	0.579
HMX2 M05376_2.00	Homo sapiens	NTTAAKTGNN	NNCAMTTAAN	SELEX Yin et al.(2017) HMX2_FL_Methyl-HT-SELEX	0.672	0.579
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.666	0.544
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.666	0.544
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	0.666	0.544
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.666	0.544
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	0.666	0.544
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	0.666	0.544
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	0.666	0.544
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.666	0.544
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.666	0.544
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.660	0.614
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.659	0.632
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.659	0.632
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.659	0.632
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.659	0.632
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.659	0.632
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.659	0.632
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.659	0.632
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.659	0.632
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.659	0.632
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.659	0.632
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.659	0.614
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.659	0.614
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.659	0.614
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.659	0.614
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.659	0.614
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.659	0.614
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.659	0.614
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.659	0.614
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_2	0.659	0.614
BARHL2 M05167_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_1	0.659	0.614
BARHL2 M05168_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_2	0.659	0.614
BARHL2 M05166_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_Methyl-HT-SELEX	0.659	0.614
BARHL2 M05169_2.00	Homo sapiens	NTAAWTGN	NCAWTTAN	SELEX Yin et al.(2017) BARHL2_FL_Methyl-HT-SELEX	0.659	0.614
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.659	0.596
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.659	0.596
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.659	0.596
Hmx1 M00524_2.00	Mus musculus	NHDAKYRNNN	NNNYRMTHDN	PBM Berger et al.(2008) Hmx1_3423	0.656	0.596
HMX1 M03243_2.00	Homo sapiens	NNTTAAKTGNY	RNCAMTTAANN	SELEX Jolma et al.(2013) HMX1_1	0.656	0.596
HMX1 M05392_2.00	Homo sapiens	BNYAAKTGN	NCAMTTRNV	SELEX Yin et al.(2017) HMX1_eDBD_HT-SELEX	0.656	0.596
HMX1 M05393_2.00	Homo sapiens	VNYAAKTGB	VCAMTTRNB	SELEX Yin et al.(2017) HMX1_eDBD_Methyl-HT-SELEX	0.656	0.596
HMX3 M03233_2.00	Homo sapiens	NNNTAAKTGNN	NNCAMTTANNN	SELEX Jolma et al.(2013) HMX3_1	0.656	0.579
Hmx M03882_2.00	Drosophila melanogaster	NYRAKYGN	NCRMTYRN	SELEX Nitta et al.(2015) Hmx_1	0.656	0.579
Hmx M06554_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Mathelier et al.(2014) MA0192.1	0.656	0.579
Hmx M06386_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Zhu et al.(2011) Hmx_Cell_FBgn0085448	0.656	0.579
Hmx M06387_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Zhu et al.(2011) Hmx_SOLEXA_FBgn0085448	0.656	0.579
HMX3 M10754_2.00	Homo sapiens	CAAGTGCGTG	CACGCACTTG	Transfac Matys et al.(2006) V$HMX1_01	0.656	0.579
Lbx2 M00465_2.00	Mus musculus	NHAABNRN	NYNVTTDN	PBM Berger et al.(2008) Lbx2_3869	0.655	0.614
LBX2 M03224_2.00	Homo sapiens	TAAYYRSNTYNAB	VTNRANSYRRTTA	SELEX Jolma et al.(2013) LBX2_1	0.655	0.614
LBX2 M03225_2.00	Homo sapiens	NNTAATTRVN	NBYAATTANN	SELEX Jolma et al.(2013) LBX2_2	0.655	0.614
LBX2 M05321_2.00	Homo sapiens	HTAAYRAG	CTYRTTAD	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_1	0.655	0.614
LBX2 M05322_2.00	Homo sapiens	NTAATTAAYKRG	CYMRTTAATTAN	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_2	0.655	0.614
LBX2 M05323_2.00	Homo sapiens	VYTAATTRGB	VCYAATTARB	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_3	0.655	0.614
LBX2 M05324_2.00	Homo sapiens	HTAAYGAG	CTCRTTAD	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_1	0.655	0.614
LBX2 M05325_2.00	Homo sapiens	ATAATTAATKAG	CTMATTAATTAT	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_2	0.655	0.614
LBX2 M05326_2.00	Homo sapiens	NNTAATKRDN	NHYMATTANN	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_3	0.655	0.614
ventx3.2 M02232_2.00	Xenopus tropicalis	ATTAATTA	TAATTAAT	PBM Weirauch et al.(2014) pTH6291	0.654	0.456
HOXA2 M02083_2.00	Homo sapiens	NNNDHHNNN	NNNDDHNNN	PBM Weirauch et al.(2014) pTH5887	0.650	0.509
Hoxa2 M00403_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa2_3079	0.650	0.509
HOXA2 M03097_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXA2_1	0.650	0.509
HOXB2 M03213_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) HOXB2_1	0.650	0.509
Hoxa2 M03251_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxa2_1	0.650	0.509
pb M03872_2.00	Drosophila melanogaster	NTRAYKRY	RYMRTYAN	SELEX Nitta et al.(2015) pb_1	0.650	0.509
HOXA2 M04962_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_HT-SELEX	0.650	0.509
HOXA2 M04965_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_HT-SELEX	0.650	0.509
HOXB2 M05292_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB2_eDBD_HT-SELEX	0.650	0.509
pb M06545_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0238.1	0.650	0.509
pb M06366_2.00	Drosophila melanogaster	BYTAATKA	TMATTARV	B1H Zhu et al.(2011) Pb_Cell_FBgn0051481	0.650	0.509
pb M06367_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Pb_SOLEXA_FBgn0051481	0.650	0.509
Hoxa2 M09566_2.00	Mus musculus	DTGATKGATKDB	VHMATCMATCAH	Misc Heinz et al.(2010) mES-Hoxa2_Donaldson_et_al.	0.650	0.509
HOXA2 M04963_2.00	Homo sapiens	NTAATTAN	NTAATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_1	0.650	0.509
HOXA2 M04964_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_2	0.650	0.509
HOXA2 M04966_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_1	0.650	0.509
HOXA2 M04967_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_2	0.650	0.509
HOXB2 M05293_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_1	0.650	0.509
HOXB2 M05294_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_2	0.650	0.509
Evx2 M00393_2.00	Mus musculus	NNTAAYNN	NNRTTANN	PBM Berger et al.(2008) Evx2_2645	0.650	0.474
Evx1 M00395_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Evx1_3952	0.650	0.474
EVX1 M03102_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX1_1	0.650	0.474
EVX2 M03215_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX2_1	0.650	0.474
EVX1 M04985_2.00	Homo sapiens	VTAATKAB	VTMATTAB	SELEX Yin et al.(2017) EVX1_eDBD_HT-SELEX	0.650	0.474
EVX2 M05295_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_HT-SELEX	0.650	0.474
EVX2 M09158_2.00	Homo sapiens	NBTTTATKRCHNN	NNDGYMATAAAVN	Misc Kulakovskiy et al.(2013) EVX2_HUMAN.H11MO.0.A	0.650	0.474
Evx1 M09174_2.00	Mus musculus	WGATTTATDRBHN	NDVYHATAAATCW	Misc Kulakovskiy et al.(2013) EVX1_MOUSE.H11MO.0.C	0.650	0.474
Evx2 M09173_2.00	Mus musculus	BTTTATKRCHBN	NVDGYMATAAAV	Misc Kulakovskiy et al.(2013) EVX2_MOUSE.H11MO.0.A	0.650	0.474
EVX2 M10736_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EVX2_04	0.650	0.474
EVX1 M04986_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_1	0.650	0.474
EVX1 M04987_2.00	Homo sapiens	HTWAYGAB	VTCRTWAD	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_2	0.650	0.474
EVX2 M05296_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_1	0.650	0.474
EVX2 M05297_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_2	0.650	0.474
eve M00556_2.00	Drosophila melanogaster	NNTAATTARN	NYTAATTANN	PBM Busser et al.(2012a) Eve	0.650	0.456
eve M02115_2.00	Drosophila melanogaster	NTAATNDNN	NNHNATTAN	PBM Weirauch et al.(2014) pTH6436	0.650	0.456
Q9BJW6_9CNID M02215_2.00	Sarsia sp. Long Island Sound	NBTAATTAVN	NBTAATTAVN	PBM Weirauch et al.(2014) pTH6287	0.650	0.456
eve M03794_2.00	Drosophila melanogaster	VYTAATKASN	NSTMATTARB	SELEX Nitta et al.(2015) eve_1	0.650	0.456
eve M06486_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0221.1	0.650	0.456
eve M06240_2.00	Drosophila melanogaster	DYTAATKA	TMATTARH	B1H Zhu et al.(2011) Eve_Cell_FBgn0000606	0.650	0.456
eve M06241_2.00	Drosophila melanogaster	HKBTAAYNDTKY	RMAHNRTTAVMD	B1H Zhu et al.(2011) eve_FlyReg_FBgn0000606	0.650	0.456
eve M06242_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Eve_SOLEXA_FBgn0000606	0.650	0.456
eve M09678_2.00	Drosophila melanogaster	NKHTAATKD	HMATTADMN	Misc Kulakovskiy et al.(2009) eve	0.650	0.456
eve M10786_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EVE_Q6	0.650	0.456
vab-7 M02186_2.00	Caenorhabditis elegans	KTAATTAK	MTAATTAM	PBM Weirauch et al.(2014) pTH6104	0.650	0.439
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.649	0.474
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.649	0.474
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.649	0.474
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.649	0.474
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.649	0.474
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.649	0.474
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.649	0.474
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.649	0.474
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.649	0.474
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.649	0.474
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.649	0.474
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.649	0.474
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.649	0.474
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.649	0.474
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.649	0.474
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.649	0.474
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.649	0.474
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.649	0.474
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.649	0.474
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.649	0.474
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.648	0.491
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.648	0.491
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.648	0.491
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.648	0.491
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.648	0.491
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.648	0.491
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.648	0.491
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.648	0.491
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.648	0.491
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.648	0.491
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.648	0.491
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.648	0.491
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.648	0.491
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.648	0.491
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.648	0.491
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.648	0.491
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.648	0.491
Hoxa1 M00450_2.00	Mus musculus	NHRATKRNN	NNYMATYDN	PBM Berger et al.(2008) Hoxa1_3425	0.647	0.526
HOXA1 M03096_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) HOXA1_1	0.647	0.526
HOXA1 M04959_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_HT-SELEX	0.647	0.526
HOXA1 M09133_2.00	Homo sapiens	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_HUMAN.H11MO.0.C	0.647	0.526
Hoxa1 M09196_2.00	Mus musculus	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_MOUSE.H11MO.0.C	0.647	0.526
HOXA1 M04960_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_1	0.647	0.526
HOXA1 M04961_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_2	0.647	0.526
Hmx3_CONSTRUCT M00537_2.00	PBM CONSTRUCTS	NHDADYRNN	NNYRHTHDN	PBM Berger et al.(2008) Hmx3_3490	0.643	0.561
lab M03797_2.00	Drosophila melanogaster	NTAATTAS	STAATTAN	SELEX Nitta et al.(2015) lab_1	0.642	0.509
lab M06493_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0230.1	0.642	0.509
lab M06260_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Zhu et al.(2011) Lab_Cell_FBgn0002522	0.642	0.509
lab M06261_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Lab_SOLEXA_FBgn0002522	0.642	0.509
Barx2 M00457_2.00	Mus musculus	NTAABNDNN	NNHNVTTAN	PBM Berger et al.(2008) Barx2_3447	0.642	0.579
BARX2 M04915_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_HT-SELEX	0.642	0.579
BARX2 M04916_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_Methyl-HT-SELEX	0.642	0.579
Barx1 M00413_2.00	Mus musculus	NNTAAYBDNN	NNHVRTTANN	PBM Berger et al.(2008) Barx1_2877	0.641	0.544
barx1 M02107_2.00	Tetraodon nigroviridis	NTAAYNNNN	NNNNRTTAN	PBM Weirauch et al.(2014) pTH6449	0.641	0.544
BARX1 M03144_2.00	Homo sapiens	TAATBGNWWWTTAATBR	YVATTAAWWWNCVATTA	SELEX Jolma et al.(2013) BARX1_1	0.641	0.544
BARX1 M03145_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BARX1_2	0.641	0.544
Barx1 M09181_2.00	Mus musculus	NNWAAKKGYTWH	DWARCMMTTWNN	Misc Kulakovskiy et al.(2013) BARX1_MOUSE.H11MO.0.C	0.641	0.544
Dfd M03784_2.00	Drosophila melanogaster	VNTAAYKRBN	NVYMRTTANB	SELEX Nitta et al.(2015) Dfd_1	0.639	0.456
Dfd M03785_2.00	Drosophila melanogaster	VYTAATKAYN	NRTMATTARB	SELEX Nitta et al.(2015) Dfd_2	0.639	0.456
Dfd M06481_2.00	Drosophila melanogaster	YTAATGA	TCATTAR	B1H Mathelier et al.(2014) MA0186.1	0.639	0.456
Dfd M06226_2.00	Drosophila melanogaster	VYTAATGA	TCATTAAB	B1H Zhu et al.(2011) Dfd_Cell_FBgn0000439	0.639	0.456
Dfd M06227_2.00	Drosophila melanogaster	TTAATKRY	RYMATTAA	B1H Zhu et al.(2011) Dfd_FlyReg_FBgn0000439	0.639	0.456
Dfd M06228_2.00	Drosophila melanogaster	NBTAATKR	YMATTAVN	B1H Zhu et al.(2011) Dfd_SOLEXA_FBgn0000439	0.639	0.456
Dfd M09675_2.00	Drosophila melanogaster	TTAATKRB	VYMATTAA	Misc Kulakovskiy et al.(2009) Dfd	0.639	0.456
Dfd M10784_2.00	Drosophila melanogaster	NNNNRKTAATNNNNNN	NNNNNNATTAMYNNNN	Transfac Matys et al.(2006) I$DFD_01	0.639	0.456
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.638	0.526
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.638	0.526
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.638	0.526
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.638	0.526
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.638	0.526
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.638	0.526
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.638	0.526
Hoxd1 M00492_2.00	Mus musculus	NRATNDNN	NNHNATYN	PBM Berger et al.(2008) Hoxd1_3448	0.636	0.526
HOXD1 M05098_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_HT-SELEX	0.636	0.526
Hoxd1 M10768_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD1_03	0.636	0.526
HOXD1 M05099_2.00	Homo sapiens	BTAATKAV	BTMATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_1	0.636	0.526
HOXD1 M05100_2.00	Homo sapiens	NTWAYGAB	VTCRTWAN	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_2	0.636	0.526
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.635	0.491
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.635	0.491
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.635	0.491
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.635	0.491
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.635	0.491
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.633	0.474
TLX3 M05233_2.00	Homo sapiens	NAATKGNNNNNNNNNNNNNCAATTN	NAATTGNNNNNNNNNNNNNCMATTN	SELEX Yin et al.(2017) TLX3_eDBD_HT-SELEX	0.633	0.614
TLX3 M05235_2.00	Homo sapiens	NAATTGNNNNNHNNNNCAATTN	NAATTGNNNNDNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_FL_HT-SELEX	0.633	0.614
TLX3 M05234_2.00	Homo sapiens	NAATTGNNNNNNNNNNDCAATTD	HAATTGHNNNNNNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_eDBD_Methyl-HT-SELEX	0.633	0.614
TLX3 M05236_2.00	Homo sapiens	HAATTRNNNNNNNNNYHATTV	BAATDRNNNNNNNNNYAATTD	SELEX Yin et al.(2017) TLX3_FL_Methyl-HT-SELEX	0.633	0.614
Q24780_9CNID M02205_2.00	Eleutheria dichotoma	NNYTAATTAMN	NKTAATTARNN	PBM Weirauch et al.(2014) pTH6308	0.633	0.456
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.632	0.474
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.632	0.474
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.632	0.474
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.632	0.456
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.632	0.456
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.626	0.474
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.626	0.474
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.626	0.474
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.626	0.474
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.626	0.456
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.623	0.456
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.623	0.456
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.623	0.456
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.623	0.456
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.623	0.456
O76842_CUPSA M02199_2.00	Cupiennius salei	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6251	0.615	0.509
HOXB1 M05057_2.00	Homo sapiens	NTAATTAS	STAATTAN	SELEX Yin et al.(2017) HOXB1_eDBD_HT-SELEX	0.615	0.509
HOXB1 M05058_2.00	Homo sapiens	GTAATBAN	NTVATTAC	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_1	0.615	0.509
HOXB1 M05059_2.00	Homo sapiens	NTRAYGMB	VKCRTYAN	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_2	0.615	0.509
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
fgenesh2_pg.scaffold_5000057	Homeodomain	136	192	NKARTAFAGYQVFQLEKRFQTQKYLAAAERQELAQRIGLTDTQVKTWFQNRRMKWKR

Links
Other Homeodomain family TFs
Other *Branchiostoma floridae* TFs

3495 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
estExt_fgenesh2_pg.C_1850050	Branchiostoma floridae	estExt_fgenesh2_pg.C_1850050	I	0.801
e_gw.777.7.1	Branchiostoma floridae	e_gw.777.7.1	I	0.799
estExt_fgenesh2_pg.C_1850052	Branchiostoma floridae	estExt_fgenesh2_pg.C_1850052	I	0.790
estExt_fgenesh2_kg.C_7770001	Branchiostoma floridae	estExt_fgenesh2_kg.C_7770001	I	0.790
estExt_fgenesh2_kg.C_1850001	Branchiostoma floridae	estExt_fgenesh2_kg.C_1850001	I	0.790
estExt_gwp.C_7770002	Branchiostoma floridae	estExt_gwp.C_7770002	I	0.790
Sakowv30037079m.g	Saccoglossus kowalevskii	Sakowv30037079m.g	I	0.774
Aqu1.227089	Amphimedon queenslandica	Aqu1.227089	I	0.771
Sakowv30037078m.g	Saccoglossus kowalevskii	Sakowv30037078m.g	I	0.763
XP_002165751.1	Hydra magnipapillata	XP_002165751.1	I	0.754
LotgiG80212	Lottia gigantea	LotgiG80212	I	0.744
Hsal_06629--XP_001121261.1_APIME	Harpegnathos saltator	Hsal_06629--XP_001121261.1_APIME	I	0.739
PPAI000970	Phlebotomus papatasi	PPAI000970	I	0.739
Cflo_12378--XP_001121261.1_APIME	Camponotus floridanus	Cflo_12378--XP_001121261.1_APIME	I	0.739
CpipJ_CPIJ015550	Culex pipiens	CpipJ_CPIJ015550	I	0.739
CPIJ015550	Culex quinquefasciatus	CPIJ015550	I	0.739
CGI_10028802	Crassostrea gigas	CGI_10028802	I	0.738
ENSAPLG00000012426	Anas platyrhynchos	ENSAPLG00000012426	I	0.736
ENSTGUG00000009093	Taeniopygia guttata	ENSTGUG00000009093	I	0.736
ENSFALG00000007996	Ficedula albicollis	ENSFALG00000007996	I	0.736
ENSPSIG00000003789	Pelodiscus sinensis	ENSPSIG00000003789	I	0.732
CapteG208832	Capitella teleta	CapteG208832	I	0.730
NEMVEDRAFT_v1g19034	Nematostella vectensis	NEMVEDRAFT_v1g19034	I	0.729
VENTX	Myotis lucifugus	ENSMLUG00000012455	I	0.716
Myotis_brandtii_VENTX_10024874	Myotis brandtii	Myotis_brandtii_VENTX_10024874	I	0.716
mox	Ciona intestinalis	ENSCING00000007464	I	0.715
VENTX	Homo sapiens	ENSG00000151650	D	0.714
ENSNLEG00000002047	Nomascus leucogenys	ENSNLEG00000002047	I	0.714
VENTX	Pan troglodytes	ENSPTRG00000003087	I	0.714
ENSCSAG00000018352	Chlorocebus sabaeus	ENSCSAG00000018352	I	0.714
VENTX	Gorilla gorilla	ENSGGOG00000003340	I	0.714
ENSMMUG00000000543	Macaca mulatta	ENSMMUG00000000543	I	0.714
VENTX	Choloepus hoffmanni	ENSCHOG00000011176	I	0.714
ENSP00000357556	Macaca fascicularis	ENSP00000357556	I	0.714
ENSPANG00000020116	Papio anubis	ENSPANG00000020116	I	0.714
ENSCSAVG00000006908	Ciona savignyi	ENSCSAVG00000006908	I	0.713
VENTX	Procavia capensis	ENSPCAG00000009772	I	0.713
ENSONIG00000014849	Oreochromis niloticus	ENSONIG00000014849	I	0.710
CapteG121761	Capitella teleta	CapteG121761	I	0.705
ENSAPLG00000013879	Anas platyrhynchos	ENSAPLG00000013879	I	0.700
Brh_R004370	Buceros rhinoceros	Brh_R004370	I	0.700
Afo_R008087	Aptenodytes forsteri	Afo_R008087	I	0.700
Aan_R012072	Calypte anna	Aan_R012072	I	0.700
Gfo_R008428	Geospiza fortis	Gfo_R008428	I	0.700
ENSFALG00000007248	Ficedula albicollis	ENSFALG00000007248	I	0.700
Tal_R002675	Tyto alba	Tal_R002675	I	0.700
ENSTGUG00000013123	Taeniopygia guttata	ENSTGUG00000013123	I	0.700
LotgiG55477	Lottia gigantea	LotgiG55477	I	0.699
BGLB006571	Biomphalaria glabrata	BGLB006571	I	0.699
ML08269a	Mnemiopsis leidyi	ML08269a	I	0.699
Alligator_sinensis_CCG001452.1	Alligator sinensis	Alligator_sinensis_CCG001452.1	I	0.698
VENTX	Tupaia belangeri	ENSTBEG00000006909	I	0.696
SMAR003413	Strigamia maritima	SMAR003413	I	0.695
vent	Gasterosteus aculeatus	ENSGACG00000002875	I	0.695
NEMVEDRAFT_v1g128302	Nematostella vectensis	NEMVEDRAFT_v1g128302	I	0.695
YQE_06005	Dendroctonus ponderosae	YQE_06005	I	0.695
MEOX2	Callithrix jacchus	ENSCJAG00000000930	I	0.694
MEOX1	Anolis carolinensis	ENSACAG00000004805	I	0.694
ENSOARG00000008280	Ovis aries	ENSOARG00000008280	I	0.694
KGM_01839	Danaus plexippus	KGM_01839	I	0.694
MEOX1	Choloepus hoffmanni	ENSCHOG00000005882	I	0.694
MEOX2	Macaca mulatta	ENSMMUG00000004976	I	0.694
ENSAMEG00000018301	Ailuropoda melanoleuca	ENSAMEG00000018301	I	0.694
ENSAMEG00000010416	Ailuropoda melanoleuca	ENSAMEG00000010416	I	0.694
fgenesh2_kg.scaffold_260000001	Branchiostoma floridae	fgenesh2_kg.scaffold_260000001	I	0.694
MEOX1	Callithrix jacchus	ENSCJAG00000010614	I	0.694
MEOX2	Anolis carolinensis	ENSACAG00000012882	I	0.694
ENSOARG00000005754	Ovis aries	ENSOARG00000005754	I	0.694
Aan_R006227	Calypte anna	Aan_R006227	I	0.694
ENSCSAG00000013409	Chlorocebus sabaeus	ENSCSAG00000013409	I	0.694
MEOX2	Cavia porcellus	ENSCPOG00000026227	I	0.694
MEOX1	Monodelphis domestica	ENSMODG00000015190	I	0.694
MEOX2	Otolemur garnettii	ENSOGAG00000014555	I	0.694
MEOX2	Myotis lucifugus	ENSMLUG00000022218	I	0.694
MEOX1	Cavia porcellus	ENSCPOG00000022047	I	0.694
LCUP013900	Lucilia cuprina	LCUP013900	I	0.694
GB47954	Apis mellifera	GB47954	I	0.694
ENSAMXG00000006600	Astyanax mexicanus	ENSAMXG00000006600	I	0.694
MEOX2	Monodelphis domestica	ENSMODG00000001656	I	0.694
MEOX1	Oryctolagus cuniculus	ENSOCUG00000002945	I	0.694
ENSAMXG00000011019	Astyanax mexicanus	ENSAMXG00000011019	I	0.694
MEOX1	Bos taurus	ENSBTAG00000015751	I	0.694
SMAR009090	Strigamia maritima	SMAR009090	I	0.694
MEOX2	Oryctolagus cuniculus	ENSOCUG00000026941	I	0.694
ENSAPLG00000007517	Anas platyrhynchos	ENSAPLG00000007517	I	0.694
ENSAPLG00000002743	Anas platyrhynchos	ENSAPLG00000002743	I	0.694
MEOX2	Bos taurus	ENSBTAG00000003238	I	0.694
Sakowv30038814m.g	Saccoglossus kowalevskii	Sakowv30038814m.g	I	0.694
Afo_R011323	Aptenodytes forsteri	Afo_R011323	I	0.694
ML16524a	Mnemiopsis leidyi	ML16524a	I	0.694
MEOX1	Canis familiaris	ENSCAFG00000014476	I	0.694
LotgiG59048	Lottia gigantea	LotgiG59048	I	0.694
MEOX1	Myotis lucifugus	ENSMLUG00000000092	I	0.694
fgenesh2_kg.scaffold_544000001	Branchiostoma floridae	fgenesh2_kg.scaffold_544000001	I	0.694
SPU_025486	Strongylocentrotus purpuratus	SPU_025486	I	0.694
MEOX1	Otolemur garnettii	ENSOGAG00000007673	I	0.694
ENSAMXG00000009327	Astyanax mexicanus	ENSAMXG00000009327	I	0.694
MEOX2	Canis familiaris	ENSCAFG00000002420	I	0.694
Ocbimv22031356m.g	Octopus bimaculoides	Ocbimv22031356m.g	I	0.694
ENSMMUG00000008995	Macaca mulatta	ENSMMUG00000008995	I	0.694
MEOX2	Meleagris gallopavo	ENSMGAG00000010089	I	0.694
ENSLOCG00000011275	Lepisosteus oculatus	ENSLOCG00000011275	I	0.694
meox2a	Gasterosteus aculeatus	ENSGACG00000012753	I	0.694
ENSSHAG00000008485	Sarcophilus harrisii	ENSSHAG00000008485	I	0.694
MEOX1	Gallus gallus	ENSGALG00000001191	I	0.694
ENSPANG00000025372	Papio anubis	ENSPANG00000025372	I	0.694
Meox1	Rattus norvegicus	ENSRNOG00000020803	I	0.694
MEOX1	Sorex araneus	ENSSARG00000001939	I	0.694
MEOX2	Gallus gallus	ENSGALG00000010794	I	0.694
ENSSHAG00000009725	Sarcophilus harrisii	ENSSHAG00000009725	I	0.694
meox1	Gasterosteus aculeatus	ENSGACG00000003722	I	0.694
MEOX2	Homo sapiens	ENSG00000106511	D	0.694
ENSSTOG00000008171	Ictidomys tridecemlineatus	ENSSTOG00000008171	I	0.694
MEOX1	Homo sapiens	ENSG00000005102	D	0.694
MEOX1	Sus scrofa	ENSSSCG00000017376	I	0.694
MEOX2	Sus scrofa	ENSSSCG00000015357	I	0.694
ENSLOCG00000012129	Lepisosteus oculatus	ENSLOCG00000012129	I	0.694
ENSPANG00000021370	Papio anubis	ENSPANG00000021370	I	0.694
Meox2	Rattus norvegicus	ENSRNOG00000006588	D	0.694
XP_002159502.1	Hydra magnipapillata	XP_002159502.1	I	0.694
ENSPFOG00000012503	Poecilia formosa	ENSPFOG00000012503	I	0.694
ENSLACG00000007651	Latimeria chalumnae	ENSLACG00000007651	I	0.694
MEOX2	Loxodonta africana	ENSLAFG00000026831	I	0.694
ENSPPYG00000017769	Pongo abelii	ENSPPYG00000017769	I	0.694
ENSLACG00000014644	Latimeria chalumnae	ENSLACG00000014644	I	0.694
MEOX1	Loxodonta africana	ENSLAFG00000003050	I	0.694
ENSPPYG00000008355	Pongo abelii	ENSPPYG00000008355	I	0.694
ENSPSIG00000005804	Pelodiscus sinensis	ENSPSIG00000005804	I	0.694
ENSPSIG00000007948	Pelodiscus sinensis	ENSPSIG00000007948	I	0.694
MEOX2	Pteropus vampyrus	ENSPVAG00000002891	I	0.694
MEOX2	Gorilla gorilla	ENSGGOG00000006252	I	0.694
MEOX1	Gorilla gorilla	ENSGGOG00000003046	I	0.694
ENSGMOG00000001262	Gadus morhua	ENSGMOG00000001262	I	0.694
MEOX2	Pan troglodytes	ENSPTRG00000018946	I	0.694
MEOX1	Pan troglodytes	ENSPTRG00000009248	I	0.694
ENSGMOG00000005319	Gadus morhua	ENSGMOG00000005319	I	0.694
ENSSTOG00000013785	Ictidomys tridecemlineatus	ENSSTOG00000013785	I	0.694
MEOX2	Felis catus	ENSFCAG00000028542	I	0.694
MEOX2	Tursiops truncatus	ENSTTRG00000013907	I	0.694
MEOX2	Vicugna pacos	ENSVPAG00000005444	I	0.694
Meox2	Dipodomys ordii	ENSDORG00000004864	I	0.694
ENSMEUG00000015930	Macropus eugenii	ENSMEUG00000015930	I	0.694
MEOX1	Tursiops truncatus	ENSTTRG00000000910	I	0.694
MEOX1	Equus caballus	ENSECAG00000013525	I	0.694
MEOX2	Equus caballus	ENSECAG00000010760	I	0.694
MEOX1	Dasypus novemcinctus	ENSDNOG00000031671	I	0.694
ENSXMAG00000019012	Xiphophorus maculatus	ENSXMAG00000019012	I	0.694
meox2a	Danio rerio	ENSDARG00000040911	I	0.694
meox1	Danio rerio	ENSDARG00000007891	I	0.694
ENSONIG00000018256	Oreochromis niloticus	ENSONIG00000018256	I	0.694
MEOX2	Ochotona princeps	ENSOPRG00000005911	I	0.694
meox2b	Danio rerio	ENSDARG00000061818	I	0.694
MEOX2	Dasypus novemcinctus	ENSDNOG00000008959	I	0.694
MEOX1	Ochotona princeps	ENSOPRG00000014934	I	0.694
meox1	Oryzias latipes	ENSORLG00000011858	I	0.694
meox2a	Oryzias latipes	ENSORLG00000016711	I	0.694
meox2	Xenopus tropicalis	XB-GENE-852818	I	0.694
ENSTGUG00000002938	Taeniopygia guttata	ENSTGUG00000002938	I	0.694
ENSFALG00000009975	Ficedula albicollis	ENSFALG00000009975	I	0.694
MEOX2	Taeniopygia guttata	ENSTGUG00000002542	I	0.694
ENSTBEG00000013303	Tupaia belangeri	ENSTBEG00000013303	I	0.694
MEOX1	Felis catus	ENSFCAG00000009910	I	0.694
meox2.S	Xenopus laevis	XB-GENE-852823	I	0.694
ENSTGUG00000013769	Taeniopygia guttata	ENSTGUG00000013769	I	0.694
ENSMEUG00000008266	Macropus eugenii	ENSMEUG00000008266	I	0.694
MEOX2	Erinaceus europaeus	ENSEEUG00000004473	I	0.694
meox2a	Takifugu rubripes	ENSTRUG00000002015	I	0.694
meox1	Takifugu rubripes	ENSTRUG00000005193	I	0.694
meox1	Tetraodon nigroviridis	ENSTNIG00000014406	I	0.694
meox2a	Tetraodon nigroviridis	ENSTNIG00000005000	I	0.694
meox2.L	Xenopus laevis	XB-GENE-6464370	I	0.694
ENSFALG00000000823	Ficedula albicollis	ENSFALG00000000823	I	0.694
ENSONIG00000006576	Oreochromis niloticus	ENSONIG00000006576	I	0.694
ENSCSAG00000003450	Chlorocebus sabaeus	ENSCSAG00000003450	I	0.694
Gfo_R009013	Geospiza fortis	Gfo_R009013	I	0.694
ENSP00000321684	Macaca fascicularis	ENSP00000321684	I	0.694
Meox1	Mus musculus	ENSMUSG00000001493	D	0.694
Myotis_brandtii_MEOX1_10015273	Myotis brandtii	Myotis_brandtii_MEOX1_10015273	I	0.694
ENSBTAP00000048217-D1	Bos grunniens	ENSBTAP00000048217-D1	I	0.694
Cmyd_10007111	Chelonia mydas	Cmyd_10007111	I	0.694
Alligator_sinensis_CCG005917.1	Alligator sinensis	Alligator_sinensis_CCG005917.1	I	0.694
ENSMPUG00000014031	Mustela putorius furo	ENSMPUG00000014031	I	0.694
CapteG173096	Capitella teleta	CapteG173096	I	0.694
ENSOANG00000004095	Ornithorhynchus anatinus	ENSOANG00000004095	I	0.694
Meox2	Mus musculus	ENSMUSG00000036144	D	0.694
Tal_R000536	Tyto alba	Tal_R000536	I	0.694
ACEP14377	Atta cephalotes	ACEP14377	I	0.694
ENSNLEG00000016373	Nomascus leucogenys	ENSNLEG00000016373	I	0.694
Pvit_07353	Pogona vitticeps	Pvit_07353	I	0.694
CGI_10014888	Crassostrea gigas	CGI_10014888	I	0.694
Gfo_R002798	Geospiza fortis	Gfo_R002798	I	0.694
ENSP00000262041	Macaca fascicularis	ENSP00000262041	I	0.694
Brh_R009615	Buceros rhinoceros	Brh_R009615	I	0.694
ENSP00000262041-D1	Bos grunniens	ENSP00000262041-D1	I	0.694
Myotis_brandtii_Meox2_10031759	Myotis brandtii	Myotis_brandtii_Meox2_10031759	I	0.694
Cmyd_10021503	Chelonia mydas	Cmyd_10021503	I	0.694
Pvit_02761	Pogona vitticeps	Pvit_02761	I	0.694
ENSMPUG00000009670	Mustela putorius furo	ENSMPUG00000009670	I	0.694
ENSLOCG00000001127	Lepisosteus oculatus	ENSLOCG00000001127	I	0.693
ENSFCAG00000031018	Felis catus	ENSFCAG00000031018	I	0.692
ML00268a	Mnemiopsis leidyi	ML00268a	I	0.692
nRc.2.0.1.g32433	Romanomermis culicivorax	nRc.2.0.1.g32433	I	0.691
ENSCSAVG00000001261	Ciona savignyi	ENSCSAVG00000001261	I	0.690
Tal_R002674	Tyto alba	Tal_R002674	I	0.690
ENSAPLG00000013881	Anas platyrhynchos	ENSAPLG00000013881	I	0.690
Afo_R008088	Aptenodytes forsteri	Afo_R008088	I	0.690
Smp_152980	Schistosoma mansoni	Smp_152980	I	0.690
ENSGALG00000027772	Gallus gallus	ENSGALG00000027772	I	0.690
Aan_R012071	Calypte anna	Aan_R012071	I	0.690
BGLB006779	Biomphalaria glabrata	BGLB006779	I	0.690
SMRZ_0000473601	Schistosoma margrebowiei	SMRZ_0000473601	I	0.690
ENSMGAG00000013941	Meleagris gallopavo	ENSMGAG00000013941	I	0.690
Alligator_sinensis_CCG001453.1	Alligator sinensis	Alligator_sinensis_CCG001453.1	I	0.688
NEMVEDRAFT_v1g39924	Nematostella vectensis	NEMVEDRAFT_v1g39924	I	0.688
Pvit_14541	Pogona vitticeps	Pvit_14541	I	0.688
Gfo_R008427	Geospiza fortis	Gfo_R008427	I	0.688
ENSTGUG00000013121	Taeniopygia guttata	ENSTGUG00000013121	I	0.688
NEMVEDRAFT_v1g123745	Nematostella vectensis	NEMVEDRAFT_v1g123745	I	0.688
ENSPSIG00000012334	Pelodiscus sinensis	ENSPSIG00000012334	I	0.688
NEMVEDRAFT_v1g123764	Nematostella vectensis	NEMVEDRAFT_v1g123764	I	0.688
ENSFALG00000007255	Ficedula albicollis	ENSFALG00000007255	I	0.688
ENSPFOG00000003903	Poecilia formosa	ENSPFOG00000003903	I	0.687
ENSXMAG00000002833	Xiphophorus maculatus	ENSXMAG00000002833	I	0.687
ASIS004942	Anopheles sinensis	ASIS004942	I	0.686
estExt_fgenesh2_pg.C_4020005	Branchiostoma floridae	estExt_fgenesh2_pg.C_4020005	I	0.686
Sakowv30000857m.g	Saccoglossus kowalevskii	Sakowv30000857m.g	I	0.686
csin110741	Clonorchis sinensis	csin110741	I	0.685
Brh_R004369	Buceros rhinoceros	Brh_R004369	I	0.685
BTMF_0001812401	Brugia timori	BTMF_0001812401	I	0.685
WUBG_03574	Wuchereria bancrofti	WUBG_03574	I	0.685
OFLC_0001592701	Onchocerca flexuosa	OFLC_0001592701	I	0.685
ACYPI33702	Acyrthosiphon pisum	ACYPI33702	I	0.685
nAv.1.0.1.g07298	Acanthocheilonema viteae	nAv.1.0.1.g07298	I	0.685
nLs.2.1.2.g09266	Litomosoides sigmodontis	nLs.2.1.2.g09266	I	0.685
LOAG_07370	Loa loa	LOAG_07370	I	0.685
WBGene00244660	Onchocerca volvulus	WBGene00244660	I	0.685
nOo.2.0.1.g07753	Onchocerca ochengi	nOo.2.0.1.g07753	I	0.685
ENSORLG00000017548	Oryzias latipes	ENSORLG00000017548	I	0.684
HOXD4	Taeniopygia guttata	ENSTGUG00000008959	I	0.684
HOXD4	Sus scrofa	ENSSSCG00000015984	I	0.684
ALUE_0001569501	Ascaris lumbricoides	ALUE_0001569501	I	0.684
hox4	Ciona intestinalis	ENSCING00000006962	I	0.684
HOXA4	Taeniopygia guttata	ENSTGUG00000002905	I	0.684
ENSNLEG00000017675	Nomascus leucogenys	ENSNLEG00000017675	I	0.684
hoxd4.L	Xenopus laevis	XB-GENE-6466680	I	0.684
HOXB4	Homo sapiens	ENSG00000182742	D	0.684
HOXA4	Canis familiaris	ENSCAFG00000002948	I	0.684
Cmyd_10010791	Chelonia mydas	Cmyd_10010791	I	0.684
HOXA4	Otolemur garnettii	ENSOGAG00000028670	I	0.684
ENSP00000407978-D3	Bos grunniens	ENSP00000407978-D3	I	0.684
AAA49756	Xenopus laevis	AAA49756	I	0.684
HOXA4	Homo sapiens	ENSG00000197576	D	0.684
ENSMPUG00000014070	Mustela putorius furo	ENSMPUG00000014070	I	0.684
Gfo_R001383	Geospiza fortis	Gfo_R001383	I	0.684
ENSMEUG00000007414	Macropus eugenii	ENSMEUG00000007414	I	0.684
HOXC4	Canis familiaris	ENSCAFG00000006611	I	0.684
HOXA4	Sus scrofa	ENSSSCG00000016704	I	0.684
HOXA4	Felis catus	ENSFCAG00000024158	I	0.684
LotgiG110972	Lottia gigantea	LotgiG110972	I	0.684
ENSPANG00000000542	Papio anubis	ENSPANG00000000542	I	0.684
ENSMMUG00000006533	Macaca mulatta	ENSMMUG00000006533	I	0.684
HOXD4	Choloepus hoffmanni	ENSCHOG00000004176	I	0.684
HOXA4	Choloepus hoffmanni	ENSCHOG00000003332	I	0.684
ENSSTOG00000020156	Ictidomys tridecemlineatus	ENSSTOG00000020156	I	0.684
ENSPANG00000010688	Papio anubis	ENSPANG00000010688	I	0.684
ENSSTOG00000009734	Ictidomys tridecemlineatus	ENSSTOG00000009734	I	0.684
ENSSTOG00000024606	Ictidomys tridecemlineatus	ENSSTOG00000024606	I	0.684
Pvit_18300	Pogona vitticeps	Pvit_18300	I	0.684
Gfo_R015842	Geospiza fortis	Gfo_R015842	I	0.684
HOXA4	Tupaia belangeri	ENSTBEG00000010665	I	0.684
HOXD4	Canis familiaris	ENSCAFG00000013452	I	0.684
ENSSTOG00000029055	Ictidomys tridecemlineatus	ENSSTOG00000029055	I	0.684
ENSNLEG00000002570	Nomascus leucogenys	ENSNLEG00000002570	I	0.684
HOXB4	Canis familiaris	ENSCAFG00000016849	I	0.684
HOXB4	Sus scrofa	ENSSSCG00000017535	I	0.684
HOXB4	Felis catus	ENSFCAG00000023225	I	0.684
HOXD4	Homo sapiens	ENSG00000170166	D	0.684
HOXD4	Echinops telfairi	ENSETEG00000019404	I	0.684
HOXD4	Dasypus novemcinctus	ENSDNOG00000019805	I	0.684
HOXB4	Dasypus novemcinctus	ENSDNOG00000039782	I	0.684
ENSCSAG00000002530	Chlorocebus sabaeus	ENSCSAG00000002530	I	0.684
ENSCSAG00000005445	Chlorocebus sabaeus	ENSCSAG00000005445	I	0.684
Pvi

fgenesh2_pg.scaffold_5000057 (Branchiostoma floridae) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

3495 Related TFs

fgenesh2_pg.scaffold_5000057 **(Branchiostoma floridae)
Homeodomain**