fgenesh2_pg.scaffold_5000057 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgenesh2_pg.scaffold_5000057 T227539_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VENTX
M02091_2.00
Homo sapiens
TTAATTAB

VTAATTAA
PBM
Weirauch et al.(2014)
pTH5490
0.714 0.526
VENTX
M00305_2.00
Homo sapiens
DTAATTRR

YYAATTAH
PBM
Barrera et al.(2016)
VENTX_REF
0.714 0.526
VENTX
M03169_2.00
Homo sapiens
YTAATBGNT

ANCVATTAR
SELEX
Jolma et al.(2013)
VENTX_1
0.714 0.526
VENTX
M03170_2.00
Homo sapiens
VSYTAATSGRWAAMCGATTAG

CTAATCGKTTWYCSATTARSB
SELEX
Jolma et al.(2013)
VENTX_2
0.714 0.526
VENTX
M05188_2.00
Homo sapiens
CGHTAATBG

CVATTADCG
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_1
0.714 0.526
VENTX
M05189_2.00
Homo sapiens
VNTAATBRNN

NNYVATTANB
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_2
0.714 0.526
VENTX
M00303_2.00
Homo sapiens
NVTAATTANNN

NNNTAATTABN
PBM
Barrera et al.(2016)
VENTX_E101K
0.714 0.526
VENTX
M05190_2.00
Homo sapiens
VHTAATKRNN

NNYMATTADB
SELEX
Yin et al.(2017)
VENTX_FL_Methyl-HT-SELEX
0.714 0.526
VENTX
M00304_2.00
Homo sapiens
NATAYATAB

VTATRTATN
PBM
Barrera et al.(2016)
VENTX_R143C
0.714 0.509
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN

NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.694 0.526
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV

BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.694 0.526
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN

NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.694 0.526
Meox2
M03271_2.00
Mus musculus
NTAATKAN

NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.694 0.526
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.694 0.526
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV

BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.694 0.526
Meox2
M10771_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.694 0.526
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.694 0.526
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN

NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.694 0.526
Meox1
M00384_2.00
Mus musculus
NTRATKRNN

NNYMATYAN
PBM
Berger et al.(2008)
Meox1_2310
0.694 0.509
MEOX1
M03077_2.00
Homo sapiens
NNTAATTASN

NSTAATTANN
SELEX
Jolma et al.(2013)
MEOX1_1
0.694 0.509
MEOX1
M04901_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1
0.694 0.509
MEOX1
M04902_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2
0.694 0.509
MEOX1
M04903_2.00
Homo sapiens
NTAAYGWB

VWCRTTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1
0.694 0.509
MEOX1
M04904_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2
0.694 0.509
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.684 0.491
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.684 0.491
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.684 0.491
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.684 0.491
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB

VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.684 0.474
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.684 0.474
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN

NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.684 0.474
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY

RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.684 0.474
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.684 0.474
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.684 0.474
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.684 0.474
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.684 0.474
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.684 0.474
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN

NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.684 0.474
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB

VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.684 0.474
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN

NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.684 0.474
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.684 0.474
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB

VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.684 0.474
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.684 0.474
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.684 0.474
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.684 0.474
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.684 0.474
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.684 0.474
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.684 0.474
btn
M03832_2.00
Drosophila melanogaster
NNTAATKANB

VNTMATTANN
SELEX
Nitta et al.(2015)
btn_1
0.678 0.526
btn
M03833_2.00
Drosophila melanogaster
VNTAATKABN

NVTMATTANB
SELEX
Nitta et al.(2015)
btn_2
0.678 0.526
btn
M06515_2.00
Drosophila melanogaster
DTAATKA

TMATTAH
B1H
Mathelier et al.(2014)
MA0215.1
0.678 0.526
btn
M06307_2.00
Drosophila melanogaster
NDTAATKA

TMATTAHN
B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949
0.678 0.526
btn
M06308_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949
0.678 0.526
ventx1.1.L
M02234_2.00
Xenopus laevis
NNNNVBNNNN

NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH6162
0.678 0.544
ventx1.2.S
M10805_2.00
Xenopus laevis
RSRMAAATWBBVS

SBBBWATTTKYSY
Transfac
Matys et al.(2006)
V$XVENT1_01
0.678 0.544
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR

YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.677 0.632
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR

YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.677 0.632
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR

YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.677 0.632
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN

NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.677 0.614
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA

TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.677 0.614
TLX2
M05020_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.677 0.614
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB

VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.677 0.614
TLX2
M05021_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.677 0.614
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG

CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.677 0.526
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK

MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.677 0.526
bsh
M02113_2.00
Drosophila melanogaster
NNTAAYBDNN

NNHVRTTANN
PBM
Weirauch et al.(2014)
pTH6569
0.676 0.614
bsh
M03786_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
bsh_1
0.676 0.614
bsh
M03787_2.00
Drosophila melanogaster
TAATTRVWTAATKR

YMATTAWBYAATTA
SELEX
Nitta et al.(2015)
bsh_2
0.676 0.614
bsh
M03788_2.00
Drosophila melanogaster
NTAATBRN

NYVATTAN
SELEX
Nitta et al.(2015)
bsh_3
0.676 0.614
bsh
M06483_2.00
Drosophila melanogaster
YTAATBR

YVATTAR
B1H
Mathelier et al.(2014)
MA0214.1
0.676 0.614
bsh
M06231_2.00
Drosophila melanogaster
HYTAATBRV

BYVATTARD
B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529
0.676 0.614
bsh
M06232_2.00
Drosophila melanogaster
NTAATKR

YMATTAN
B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529
0.676 0.614
Bsx
M00516_2.00
Mus musculus
NTAAYBDNN

NNHVRTTAN
PBM
Berger et al.(2008)
Bsx_3483
0.674 0.596
BSX
M03235_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BSX_1
0.674 0.596
BSX
M05377_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1
0.674 0.596
BSX
M05378_2.00
Homo sapiens
BTAATBRV

BYVATTAV
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2
0.674 0.596
BSX
M05379_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1
0.674 0.596
BSX
M05380_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2
0.674 0.596
Nanog
M02098_2.00
Mus musculus
NHDAYNDNN

NNHNRTHDN
PBM
Weirauch et al.(2014)
pTH5685
0.673 0.526
NANOG
M05015_2.00
Homo sapiens
NYRABBVB

VBVVTYRN
SELEX
Yin et al.(2017)
NANOG_eDBD_HT-SELEX
0.673 0.526
NANOG
M09139_2.00
Homo sapiens
NTYWRCATNWSAAWRVN

NBYWTTSWNATGYWRAN
Misc
Kulakovskiy et al.(2013)
NANOG_HUMAN.H11MO.0.A
0.673 0.526
Nanog
M09176_2.00
Mus musculus
HTYWRMAWNWSAAWRVV

BBYWTTSWNWTKYWRAD
Misc
Kulakovskiy et al.(2013)
NANOG_MOUSE.H11MO.0.A
0.673 0.526
Nanog
M09565_2.00
Mus musculus
BYTRATKGSY

RSCMATYARV
Misc
Heinz et al.(2010)
mES-Nanog_GSE11724
0.673 0.526
NANOG
M10664_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_01
0.673 0.526
NANOG
M10665_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_02
0.673 0.526
NANOG
M10666_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_05
0.673 0.526
NANOG
M10667_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_07
0.673 0.526
NANOG
M10668_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_Q3
0.673 0.526
NANOG
M10669_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_Q6
0.673 0.526
NANOG
M05016_2.00
Homo sapiens
NHAAYGH

DCRTTDN
SELEX
Yin et al.(2017)
NANOG_eDBD_Methyl-HT-SELEX_1
0.673 0.526
NANOG
M05017_2.00
Homo sapiens
NYRABKRN

NYMVTYRN
SELEX
Yin et al.(2017)
NANOG_eDBD_Methyl-HT-SELEX_2
0.673 0.526
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN

NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.672 0.579
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN

NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.672 0.579
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS

SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.672 0.579
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.672 0.579
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN

NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.672 0.579
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.672 0.579
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN

NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.666 0.544
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH

DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.666 0.544
exex
M03871_2.00
Drosophila melanogaster
NNNNYAATTNNYDN

NHRNNAATTRNNNN
SELEX
Nitta et al.(2015)
exex_1
0.666 0.544
MNX1
M05126_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.666 0.544
exex
M06544_2.00
Drosophila melanogaster
BTAATTA

TAATTAV
B1H
Mathelier et al.(2014)
MA0224.1
0.666 0.544
exex
M06364_2.00
Drosophila melanogaster
TAATTAV

BTAATTA
B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156
0.666 0.544
exex
M06365_2.00
Drosophila melanogaster
TAATBR

YVATTA
B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156
0.666 0.544
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB

VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.666 0.544
MNX1
M05128_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.666 0.544
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN

NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.660 0.614
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.659 0.632
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.659 0.632
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN

NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.659 0.632
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG

CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.659 0.632
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN

NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.659 0.632
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.659 0.632
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.659 0.632
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN

NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.659 0.632
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG

CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.659 0.632
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN

NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.659 0.632
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.659 0.614
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.659 0.614
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN

NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.659 0.614
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR

YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.659 0.614
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.659 0.614
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.659 0.614
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG

CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.659 0.614
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY

RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.659 0.614
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.659 0.614
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.659 0.614
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.659 0.614
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.659 0.614
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN

NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.659 0.614
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH

DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.659 0.596
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.659 0.596
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG

CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.659 0.596
Hmx1
M00524_2.00
Mus musculus
NHDAKYRNNN

NNNYRMTHDN
PBM
Berger et al.(2008)
Hmx1_3423
0.656 0.596
HMX1
M03243_2.00
Homo sapiens
NNTTAAKTGNY

RNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX1_1
0.656 0.596
HMX1
M05392_2.00
Homo sapiens
BNYAAKTGN

NCAMTTRNV
SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX
0.656 0.596
HMX1
M05393_2.00
Homo sapiens
VNYAAKTGB

VCAMTTRNB
SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX
0.656 0.596
HMX3
M03233_2.00
Homo sapiens
NNNTAAKTGNN

NNCAMTTANNN
SELEX
Jolma et al.(2013)
HMX3_1
0.656 0.579
Hmx
M03882_2.00
Drosophila melanogaster
NYRAKYGN

NCRMTYRN
SELEX
Nitta et al.(2015)
Hmx_1
0.656 0.579
Hmx
M06554_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Mathelier et al.(2014)
MA0192.1
0.656 0.579
Hmx
M06386_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448
0.656 0.579
Hmx
M06387_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448
0.656 0.579
HMX3
M10754_2.00
Homo sapiens
CAAGTGCGTG

CACGCACTTG
Transfac
Matys et al.(2006)
V$HMX1_01
0.656 0.579
Lbx2
M00465_2.00
Mus musculus
NHAABNRN

NYNVTTDN
PBM
Berger et al.(2008)
Lbx2_3869
0.655 0.614
LBX2
M03224_2.00
Homo sapiens
TAAYYRSNTYNAB

VTNRANSYRRTTA
SELEX
Jolma et al.(2013)
LBX2_1
0.655 0.614
LBX2
M03225_2.00
Homo sapiens
NNTAATTRVN

NBYAATTANN
SELEX
Jolma et al.(2013)
LBX2_2
0.655 0.614
LBX2
M05321_2.00
Homo sapiens
HTAAYRAG

CTYRTTAD
SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_1
0.655 0.614
LBX2
M05322_2.00
Homo sapiens
NTAATTAAYKRG

CYMRTTAATTAN
SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_2
0.655 0.614
LBX2
M05323_2.00
Homo sapiens
VYTAATTRGB

VCYAATTARB
SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_3
0.655 0.614
LBX2
M05324_2.00
Homo sapiens
HTAAYGAG

CTCRTTAD
SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_1
0.655 0.614
LBX2
M05325_2.00
Homo sapiens
ATAATTAATKAG

CTMATTAATTAT
SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_2
0.655 0.614
LBX2
M05326_2.00
Homo sapiens
NNTAATKRDN

NHYMATTANN
SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_3
0.655 0.614
ventx3.2
M02232_2.00
Xenopus tropicalis
ATTAATTA

TAATTAAT
PBM
Weirauch et al.(2014)
pTH6291
0.654 0.456
HOXA2
M02083_2.00
Homo sapiens
NNNDHHNNN

NNNDDHNNN
PBM
Weirauch et al.(2014)
pTH5887
0.650 0.509
Hoxa2
M00403_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa2_3079
0.650 0.509
HOXA2
M03097_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXA2_1
0.650 0.509
HOXB2
M03213_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
HOXB2_1
0.650 0.509
Hoxa2
M03251_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxa2_1
0.650 0.509
pb
M03872_2.00
Drosophila melanogaster
NTRAYKRY

RYMRTYAN
SELEX
Nitta et al.(2015)
pb_1
0.650 0.509
HOXA2
M04962_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
0.650 0.509
HOXA2
M04965_2.00
Homo sapiens
NTAATKAB

VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
0.650 0.509
HOXB2
M05292_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
0.650 0.509
pb
M06545_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0238.1
0.650 0.509
pb
M06366_2.00
Drosophila melanogaster
BYTAATKA

TMATTARV
B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481
0.650 0.509
pb
M06367_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481
0.650 0.509
Hoxa2
M09566_2.00
Mus musculus
DTGATKGATKDB

VHMATCMATCAH
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
0.650 0.509
HOXA2
M04963_2.00
Homo sapiens
NTAATTAN

NTAATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
0.650 0.509
HOXA2
M04964_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
0.650 0.509
HOXA2
M04966_2.00
Homo sapiens
NTAATKAB

VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
0.650 0.509
HOXA2
M04967_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
0.650 0.509
HOXB2
M05293_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
0.650 0.509
HOXB2
M05294_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
0.650 0.509
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.650 0.474
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.650 0.474
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.650 0.474
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.650 0.474
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.650 0.474
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.650 0.474
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.650 0.474
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.650 0.474
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.650 0.474
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.650 0.474
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.650 0.474
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.650 0.474
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.650 0.474
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.650 0.474
eve
M00556_2.00
Drosophila melanogaster
NNTAATTARN

NYTAATTANN
PBM
Busser et al.(2012a)
Eve
0.650 0.456
eve
M02115_2.00
Drosophila melanogaster
NTAATNDNN

NNHNATTAN
PBM
Weirauch et al.(2014)
pTH6436
0.650 0.456
Q9BJW6_9CNID
M02215_2.00
Sarsia sp. Long Island Sound
NBTAATTAVN

NBTAATTAVN
PBM
Weirauch et al.(2014)
pTH6287
0.650 0.456
eve
M03794_2.00
Drosophila melanogaster
VYTAATKASN

NSTMATTARB
SELEX
Nitta et al.(2015)
eve_1
0.650 0.456
eve
M06486_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0221.1
0.650 0.456
eve
M06240_2.00
Drosophila melanogaster
DYTAATKA

TMATTARH
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
0.650 0.456
eve
M06241_2.00
Drosophila melanogaster
HKBTAAYNDTKY

RMAHNRTTAVMD
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
0.650 0.456
eve
M06242_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
0.650 0.456
eve
M09678_2.00
Drosophila melanogaster
NKHTAATKD

HMATTADMN
Misc
Kulakovskiy et al.(2009)
eve
0.650 0.456
eve
M10786_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EVE_Q6
0.650 0.456
vab-7
M02186_2.00
Caenorhabditis elegans
KTAATTAK

MTAATTAM
PBM
Weirauch et al.(2014)
pTH6104
0.650 0.439
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.649 0.474
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.649 0.474
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.649 0.474
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.649 0.474
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.649 0.474
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.649 0.474
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.649 0.474
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.649 0.474
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.649 0.474
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.649 0.474
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.649 0.474
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.649 0.474
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.649 0.474
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.649 0.474
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.649 0.474
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.649 0.474
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.649 0.474
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.649 0.474
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.649 0.474
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.649 0.474
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.648 0.491
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN

NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.648 0.491
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN

NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.648 0.491
HOXA5
M04968_2.00
Homo sapiens
STAATKRS

SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.648 0.491
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB

VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.648 0.491
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.648 0.491
HOXB5
M05054_2.00
Homo sapiens
STMATKAB

VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.648 0.491
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR

YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.648 0.491
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK

MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.648 0.491
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.648 0.491
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.648 0.491
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.648 0.491
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.648 0.491
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.648 0.491
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.648 0.491
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB

VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.648 0.491
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.648 0.491
Hoxa1
M00450_2.00
Mus musculus
NHRATKRNN

NNYMATYDN
PBM
Berger et al.(2008)
Hoxa1_3425
0.647 0.526
HOXA1
M03096_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
HOXA1_1
0.647 0.526
HOXA1
M04959_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX
0.647 0.526
HOXA1
M09133_2.00
Homo sapiens
NKGATGGATG

CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C
0.647 0.526
Hoxa1
M09196_2.00
Mus musculus
NKGATGGATG

CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C
0.647 0.526
HOXA1
M04960_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1
0.647 0.526
HOXA1
M04961_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2
0.647 0.526
Hmx3_CONSTRUCT
M00537_2.00
PBM CONSTRUCTS
NHDADYRNN

NNYRHTHDN
PBM
Berger et al.(2008)
Hmx3_3490
0.643 0.561
lab
M03797_2.00
Drosophila melanogaster
NTAATTAS

STAATTAN
SELEX
Nitta et al.(2015)
lab_1
0.642 0.509
lab
M06493_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0230.1
0.642 0.509
lab
M06260_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522
0.642 0.509
lab
M06261_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522
0.642 0.509
Barx2
M00457_2.00
Mus musculus
NTAABNDNN

NNHNVTTAN
PBM
Berger et al.(2008)
Barx2_3447
0.642 0.579
BARX2
M04915_2.00
Homo sapiens
NTAAYKRTTWWN

NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX
0.642 0.579
BARX2
M04916_2.00
Homo sapiens
NTAAYKRTTWWN

NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX
0.642 0.579
Barx1
M00413_2.00
Mus musculus
NNTAAYBDNN

NNHVRTTANN
PBM
Berger et al.(2008)
Barx1_2877
0.641 0.544
barx1
M02107_2.00
Tetraodon nigroviridis
NTAAYNNNN

NNNNRTTAN
PBM
Weirauch et al.(2014)
pTH6449
0.641 0.544
BARX1
M03144_2.00
Homo sapiens
TAATBGNWWWTTAATBR

YVATTAAWWWNCVATTA
SELEX
Jolma et al.(2013)
BARX1_1
0.641 0.544
BARX1
M03145_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BARX1_2
0.641 0.544
Barx1
M09181_2.00
Mus musculus
NNWAAKKGYTWH

DWARCMMTTWNN
Misc
Kulakovskiy et al.(2013)
BARX1_MOUSE.H11MO.0.C
0.641 0.544
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.639 0.456
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.639 0.456
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.639 0.456
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.639 0.456
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.639 0.456
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.639 0.456
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.639 0.456
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.639 0.456
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.638 0.526
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.638 0.526
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.638 0.526
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.638 0.526
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.638 0.526
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.638 0.526
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.638 0.526
Hoxd1
M00492_2.00
Mus musculus
NRATNDNN

NNHNATYN
PBM
Berger et al.(2008)
Hoxd1_3448
0.636 0.526
HOXD1
M05098_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
HOXD1_eDBD_HT-SELEX
0.636 0.526
Hoxd1
M10768_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD1_03
0.636 0.526
HOXD1
M05099_2.00
Homo sapiens
BTAATKAV

BTMATTAV
SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_1
0.636 0.526
HOXD1
M05100_2.00
Homo sapiens
NTWAYGAB

VTCRTWAN
SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_2
0.636 0.526
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.635 0.491
zen
M06500_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.635 0.491
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA

TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.635 0.491
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG

CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.635 0.491
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.635 0.491
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC

GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.633 0.474
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN

NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.633 0.614
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN

NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.633 0.614
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD

HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.633 0.614
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV

BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.633 0.614
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN

NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.633 0.456
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN

NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.632 0.474
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.632 0.474
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB

VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.632 0.474
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.632 0.456
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.632 0.456
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.626 0.474
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.626 0.474
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA

TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.626 0.474
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.626 0.474
Hoxc5
M00422_2.00
Mus musculus
NWRATND

HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.626 0.456
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.623 0.456
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.623 0.456
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS

STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.623 0.456
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY

RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.623 0.456
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC

GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.623 0.456
O76842_CUPSA
M02199_2.00
Cupiennius salei
TTAATTAB

VTAATTAA
PBM
Weirauch et al.(2014)
pTH6251
0.615 0.509
HOXB1
M05057_2.00
Homo sapiens
NTAATTAS

STAATTAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_HT-SELEX
0.615 0.509
HOXB1
M05058_2.00
Homo sapiens
GTAATBAN

NTVATTAC
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_1
0.615 0.509
HOXB1
M05059_2.00
Homo sapiens
NTRAYGMB

VKCRTYAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_2
0.615 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_5000057 Homeodomain 136 192

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

3495 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_fgenesh2_pg.C_1850050 Branchiostoma floridae estExt_fgenesh2_pg.C_1850050 I 0.801
e_gw.777.7.1 Branchiostoma floridae e_gw.777.7.1 I 0.799
estExt_fgenesh2_pg.C_1850052 Branchiostoma floridae estExt_fgenesh2_pg.C_1850052 I 0.790
estExt_fgenesh2_kg.C_7770001 Branchiostoma floridae estExt_fgenesh2_kg.C_7770001 I 0.790
estExt_fgenesh2_kg.C_1850001 Branchiostoma floridae estExt_fgenesh2_kg.C_1850001 I 0.790
estExt_gwp.C_7770002 Branchiostoma floridae estExt_gwp.C_7770002 I 0.790
Sakowv30037079m.g Saccoglossus kowalevskii Sakowv30037079m.g I 0.774
Aqu1.227089 Amphimedon queenslandica Aqu1.227089 I 0.771
Sakowv30037078m.g Saccoglossus kowalevskii Sakowv30037078m.g I 0.763
XP_002165751.1 Hydra magnipapillata XP_002165751.1 I 0.754
LotgiG80212 Lottia gigantea LotgiG80212 I 0.744
Hsal_06629--XP_001121261.1_APIME Harpegnathos saltator Hsal_06629--XP_001121261.1_APIME I 0.739
PPAI000970 Phlebotomus papatasi PPAI000970 I 0.739
Cflo_12378--XP_001121261.1_APIME Camponotus floridanus Cflo_12378--XP_001121261.1_APIME I 0.739
CpipJ_CPIJ015550 Culex pipiens CpipJ_CPIJ015550 I 0.739
CPIJ015550 Culex quinquefasciatus CPIJ015550 I 0.739
CGI_10028802 Crassostrea gigas CGI_10028802 I 0.738
ENSAPLG00000012426 Anas platyrhynchos ENSAPLG00000012426 I 0.736
ENSTGUG00000009093 Taeniopygia guttata ENSTGUG00000009093 I 0.736
ENSFALG00000007996 Ficedula albicollis ENSFALG00000007996 I 0.736
ENSPSIG00000003789 Pelodiscus sinensis ENSPSIG00000003789 I 0.732
CapteG208832 Capitella teleta CapteG208832 I 0.730
NEMVEDRAFT_v1g19034 Nematostella vectensis NEMVEDRAFT_v1g19034 I 0.729
VENTX Myotis lucifugus ENSMLUG00000012455 I 0.716
Myotis_brandtii_VENTX_10024874 Myotis brandtii Myotis_brandtii_VENTX_10024874 I 0.716
mox Ciona intestinalis ENSCING00000007464 I 0.715
VENTX Homo sapiens ENSG00000151650 D 0.714
ENSNLEG00000002047 Nomascus leucogenys ENSNLEG00000002047 I 0.714
VENTX Pan troglodytes ENSPTRG00000003087 I 0.714
ENSCSAG00000018352 Chlorocebus sabaeus ENSCSAG00000018352 I 0.714
VENTX Gorilla gorilla ENSGGOG00000003340 I 0.714
ENSMMUG00000000543 Macaca mulatta ENSMMUG00000000543 I 0.714
VENTX Choloepus hoffmanni ENSCHOG00000011176 I 0.714
ENSP00000357556 Macaca fascicularis ENSP00000357556 I 0.714
ENSPANG00000020116 Papio anubis ENSPANG00000020116 I 0.714
ENSCSAVG00000006908 Ciona savignyi ENSCSAVG00000006908 I 0.713
VENTX Procavia capensis ENSPCAG00000009772 I 0.713
ENSONIG00000014849 Oreochromis niloticus ENSONIG00000014849 I 0.710
CapteG121761 Capitella teleta CapteG121761 I 0.705
ENSAPLG00000013879 Anas platyrhynchos ENSAPLG00000013879 I 0.700
Brh_R004370 Buceros rhinoceros Brh_R004370 I 0.700
Afo_R008087 Aptenodytes forsteri Afo_R008087 I 0.700
Aan_R012072 Calypte anna Aan_R012072 I 0.700
Gfo_R008428 Geospiza fortis Gfo_R008428 I 0.700
ENSFALG00000007248 Ficedula albicollis ENSFALG00000007248 I 0.700
Tal_R002675 Tyto alba Tal_R002675 I 0.700
ENSTGUG00000013123 Taeniopygia guttata ENSTGUG00000013123 I 0.700
LotgiG55477 Lottia gigantea LotgiG55477 I 0.699
BGLB006571 Biomphalaria glabrata BGLB006571 I 0.699
ML08269a Mnemiopsis leidyi ML08269a I 0.699
Alligator_sinensis_CCG001452.1 Alligator sinensis Alligator_sinensis_CCG001452.1 I 0.698
VENTX Tupaia belangeri ENSTBEG00000006909 I 0.696
SMAR003413 Strigamia maritima SMAR003413 I 0.695
vent Gasterosteus aculeatus ENSGACG00000002875 I 0.695
NEMVEDRAFT_v1g128302 Nematostella vectensis NEMVEDRAFT_v1g128302 I 0.695
YQE_06005 Dendroctonus ponderosae YQE_06005 I 0.695
MEOX2 Callithrix jacchus ENSCJAG00000000930 I 0.694
MEOX1 Anolis carolinensis ENSACAG00000004805 I 0.694
ENSOARG00000008280 Ovis aries ENSOARG00000008280 I 0.694
KGM_01839 Danaus plexippus KGM_01839 I 0.694
MEOX1 Choloepus hoffmanni ENSCHOG00000005882 I 0.694
MEOX2 Macaca mulatta ENSMMUG00000004976 I 0.694
ENSAMEG00000018301 Ailuropoda melanoleuca ENSAMEG00000018301 I 0.694
ENSAMEG00000010416 Ailuropoda melanoleuca ENSAMEG00000010416 I 0.694
fgenesh2_kg.scaffold_260000001 Branchiostoma floridae fgenesh2_kg.scaffold_260000001 I 0.694
MEOX1 Callithrix jacchus ENSCJAG00000010614 I 0.694
MEOX2 Anolis carolinensis ENSACAG00000012882 I 0.694
ENSOARG00000005754 Ovis aries ENSOARG00000005754 I 0.694
Aan_R006227 Calypte anna Aan_R006227 I 0.694
ENSCSAG00000013409 Chlorocebus sabaeus ENSCSAG00000013409 I 0.694
MEOX2 Cavia porcellus ENSCPOG00000026227 I 0.694
MEOX1 Monodelphis domestica ENSMODG00000015190 I 0.694
MEOX2 Otolemur garnettii ENSOGAG00000014555 I 0.694
MEOX2 Myotis lucifugus ENSMLUG00000022218 I 0.694
MEOX1 Cavia porcellus ENSCPOG00000022047 I 0.694
LCUP013900 Lucilia cuprina LCUP013900 I 0.694
GB47954 Apis mellifera GB47954 I 0.694
ENSAMXG00000006600 Astyanax mexicanus ENSAMXG00000006600 I 0.694
MEOX2 Monodelphis domestica ENSMODG00000001656 I 0.694
MEOX1 Oryctolagus cuniculus ENSOCUG00000002945 I 0.694
ENSAMXG00000011019 Astyanax mexicanus ENSAMXG00000011019 I 0.694
MEOX1 Bos taurus ENSBTAG00000015751 I 0.694
SMAR009090 Strigamia maritima SMAR009090 I 0.694
MEOX2 Oryctolagus cuniculus ENSOCUG00000026941 I 0.694
ENSAPLG00000007517 Anas platyrhynchos ENSAPLG00000007517 I 0.694
ENSAPLG00000002743 Anas platyrhynchos ENSAPLG00000002743 I 0.694
MEOX2 Bos taurus ENSBTAG00000003238 I 0.694
Sakowv30038814m.g Saccoglossus kowalevskii Sakowv30038814m.g I 0.694
Afo_R011323 Aptenodytes forsteri Afo_R011323 I 0.694
ML16524a Mnemiopsis leidyi ML16524a I 0.694
MEOX1 Canis familiaris ENSCAFG00000014476 I 0.694
LotgiG59048 Lottia gigantea LotgiG59048 I 0.694
MEOX1 Myotis lucifugus ENSMLUG00000000092 I 0.694
fgenesh2_kg.scaffold_544000001 Branchiostoma floridae fgenesh2_kg.scaffold_544000001 I 0.694
SPU_025486 Strongylocentrotus purpuratus SPU_025486 I 0.694
MEOX1 Otolemur garnettii ENSOGAG00000007673 I 0.694
ENSAMXG00000009327 Astyanax mexicanus ENSAMXG00000009327 I 0.694
MEOX2 Canis familiaris ENSCAFG00000002420 I 0.694
Ocbimv22031356m.g Octopus bimaculoides Ocbimv22031356m.g I 0.694
ENSMMUG00000008995 Macaca mulatta ENSMMUG00000008995 I 0.694
MEOX2 Meleagris gallopavo ENSMGAG00000010089 I 0.694
ENSLOCG00000011275 Lepisosteus oculatus ENSLOCG00000011275 I 0.694
meox2a Gasterosteus aculeatus ENSGACG00000012753 I 0.694
ENSSHAG00000008485 Sarcophilus harrisii ENSSHAG00000008485 I 0.694
MEOX1 Gallus gallus ENSGALG00000001191 I 0.694
ENSPANG00000025372 Papio anubis ENSPANG00000025372 I 0.694
Meox1 Rattus norvegicus ENSRNOG00000020803 I 0.694
MEOX1 Sorex araneus ENSSARG00000001939 I 0.694
MEOX2 Gallus gallus ENSGALG00000010794 I 0.694
ENSSHAG00000009725 Sarcophilus harrisii ENSSHAG00000009725 I 0.694
meox1 Gasterosteus aculeatus ENSGACG00000003722 I 0.694
MEOX2 Homo sapiens ENSG00000106511 D 0.694
ENSSTOG00000008171 Ictidomys tridecemlineatus ENSSTOG00000008171 I 0.694
MEOX1 Homo sapiens ENSG00000005102 D 0.694
MEOX1 Sus scrofa ENSSSCG00000017376 I 0.694
MEOX2 Sus scrofa ENSSSCG00000015357 I 0.694
ENSLOCG00000012129 Lepisosteus oculatus ENSLOCG00000012129 I 0.694
ENSPANG00000021370 Papio anubis ENSPANG00000021370 I 0.694
Meox2 Rattus norvegicus ENSRNOG00000006588 D 0.694
XP_002159502.1 Hydra magnipapillata XP_002159502.1 I 0.694
ENSPFOG00000012503 Poecilia formosa ENSPFOG00000012503 I 0.694
ENSLACG00000007651 Latimeria chalumnae ENSLACG00000007651 I 0.694
MEOX2 Loxodonta africana ENSLAFG00000026831 I 0.694
ENSPPYG00000017769 Pongo abelii ENSPPYG00000017769 I 0.694
ENSLACG00000014644 Latimeria chalumnae ENSLACG00000014644 I 0.694
MEOX1 Loxodonta africana ENSLAFG00000003050 I 0.694
ENSPPYG00000008355 Pongo abelii ENSPPYG00000008355 I 0.694
ENSPSIG00000005804 Pelodiscus sinensis ENSPSIG00000005804 I 0.694
ENSPSIG00000007948 Pelodiscus sinensis ENSPSIG00000007948 I 0.694
MEOX2 Pteropus vampyrus ENSPVAG00000002891 I 0.694
MEOX2 Gorilla gorilla ENSGGOG00000006252 I 0.694
MEOX1 Gorilla gorilla ENSGGOG00000003046 I 0.694
ENSGMOG00000001262 Gadus morhua ENSGMOG00000001262 I 0.694
MEOX2 Pan troglodytes ENSPTRG00000018946 I 0.694
MEOX1 Pan troglodytes ENSPTRG00000009248 I 0.694
ENSGMOG00000005319 Gadus morhua ENSGMOG00000005319 I 0.694
ENSSTOG00000013785 Ictidomys tridecemlineatus ENSSTOG00000013785 I 0.694
MEOX2 Felis catus ENSFCAG00000028542 I 0.694
MEOX2 Tursiops truncatus ENSTTRG00000013907 I 0.694
MEOX2 Vicugna pacos ENSVPAG00000005444 I 0.694
Meox2 Dipodomys ordii ENSDORG00000004864 I 0.694
ENSMEUG00000015930 Macropus eugenii ENSMEUG00000015930 I 0.694
MEOX1 Tursiops truncatus ENSTTRG00000000910 I 0.694
MEOX1 Equus caballus ENSECAG00000013525 I 0.694
MEOX2 Equus caballus ENSECAG00000010760 I 0.694
MEOX1 Dasypus novemcinctus ENSDNOG00000031671 I 0.694
ENSXMAG00000019012 Xiphophorus maculatus ENSXMAG00000019012 I 0.694
meox2a Danio rerio ENSDARG00000040911 I 0.694
meox1 Danio rerio ENSDARG00000007891 I 0.694
ENSONIG00000018256 Oreochromis niloticus ENSONIG00000018256 I 0.694
MEOX2 Ochotona princeps ENSOPRG00000005911 I 0.694
meox2b Danio rerio ENSDARG00000061818 I 0.694
MEOX2 Dasypus novemcinctus ENSDNOG00000008959 I 0.694
MEOX1 Ochotona princeps ENSOPRG00000014934 I 0.694
meox1 Oryzias latipes ENSORLG00000011858 I 0.694
meox2a Oryzias latipes ENSORLG00000016711 I 0.694
meox2 Xenopus tropicalis XB-GENE-852818 I 0.694
ENSTGUG00000002938 Taeniopygia guttata ENSTGUG00000002938 I 0.694
ENSFALG00000009975 Ficedula albicollis ENSFALG00000009975 I 0.694
MEOX2 Taeniopygia guttata ENSTGUG00000002542 I 0.694
ENSTBEG00000013303 Tupaia belangeri ENSTBEG00000013303 I 0.694
MEOX1 Felis catus ENSFCAG00000009910 I 0.694
meox2.S Xenopus laevis XB-GENE-852823 I 0.694
ENSTGUG00000013769 Taeniopygia guttata ENSTGUG00000013769 I 0.694
ENSMEUG00000008266 Macropus eugenii ENSMEUG00000008266 I 0.694
MEOX2 Erinaceus europaeus ENSEEUG00000004473 I 0.694
meox2a Takifugu rubripes ENSTRUG00000002015 I 0.694
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.694
meox1 Tetraodon nigroviridis ENSTNIG00000014406 I 0.694
meox2a Tetraodon nigroviridis ENSTNIG00000005000 I 0.694
meox2.L Xenopus laevis XB-GENE-6464370 I 0.694
ENSFALG00000000823 Ficedula albicollis ENSFALG00000000823 I 0.694
ENSONIG00000006576 Oreochromis niloticus ENSONIG00000006576 I 0.694
ENSCSAG00000003450 Chlorocebus sabaeus ENSCSAG00000003450 I 0.694
Gfo_R009013 Geospiza fortis Gfo_R009013 I 0.694
ENSP00000321684 Macaca fascicularis ENSP00000321684 I 0.694
Meox1 Mus musculus ENSMUSG00000001493 D 0.694
Myotis_brandtii_MEOX1_10015273 Myotis brandtii Myotis_brandtii_MEOX1_10015273 I 0.694
ENSBTAP00000048217-D1 Bos grunniens ENSBTAP00000048217-D1 I 0.694
Cmyd_10007111 Chelonia mydas Cmyd_10007111 I 0.694
Alligator_sinensis_CCG005917.1 Alligator sinensis Alligator_sinensis_CCG005917.1 I 0.694
ENSMPUG00000014031 Mustela putorius furo ENSMPUG00000014031 I 0.694
CapteG173096 Capitella teleta CapteG173096 I 0.694
ENSOANG00000004095 Ornithorhynchus anatinus ENSOANG00000004095 I 0.694
Meox2 Mus musculus ENSMUSG00000036144 D 0.694
Tal_R000536 Tyto alba Tal_R000536 I 0.694
ACEP14377 Atta cephalotes ACEP14377 I 0.694
ENSNLEG00000016373 Nomascus leucogenys ENSNLEG00000016373 I 0.694
Pvit_07353 Pogona vitticeps Pvit_07353 I 0.694
CGI_10014888 Crassostrea gigas CGI_10014888 I 0.694
Gfo_R002798 Geospiza fortis Gfo_R002798 I 0.694
ENSP00000262041 Macaca fascicularis ENSP00000262041 I 0.694
Brh_R009615 Buceros rhinoceros Brh_R009615 I 0.694
ENSP00000262041-D1 Bos grunniens ENSP00000262041-D1 I 0.694
Myotis_brandtii_Meox2_10031759 Myotis brandtii Myotis_brandtii_Meox2_10031759 I 0.694
Cmyd_10021503 Chelonia mydas Cmyd_10021503 I 0.694
Pvit_02761 Pogona vitticeps Pvit_02761 I 0.694
ENSMPUG00000009670 Mustela putorius furo ENSMPUG00000009670 I 0.694
ENSLOCG00000001127 Lepisosteus oculatus ENSLOCG00000001127 I 0.693
ENSFCAG00000031018 Felis catus ENSFCAG00000031018 I 0.692
ML00268a Mnemiopsis leidyi ML00268a I 0.692
nRc.2.0.1.g32433 Romanomermis culicivorax nRc.2.0.1.g32433 I 0.691
ENSCSAVG00000001261 Ciona savignyi ENSCSAVG00000001261 I 0.690
Tal_R002674 Tyto alba Tal_R002674 I 0.690
ENSAPLG00000013881 Anas platyrhynchos ENSAPLG00000013881 I 0.690
Afo_R008088 Aptenodytes forsteri Afo_R008088 I 0.690
Smp_152980 Schistosoma mansoni Smp_152980 I 0.690
ENSGALG00000027772 Gallus gallus ENSGALG00000027772 I 0.690
Aan_R012071 Calypte anna Aan_R012071 I 0.690
BGLB006779 Biomphalaria glabrata BGLB006779 I 0.690
SMRZ_0000473601 Schistosoma margrebowiei SMRZ_0000473601 I 0.690
ENSMGAG00000013941 Meleagris gallopavo ENSMGAG00000013941 I 0.690
Alligator_sinensis_CCG001453.1 Alligator sinensis Alligator_sinensis_CCG001453.1 I 0.688
NEMVEDRAFT_v1g39924 Nematostella vectensis NEMVEDRAFT_v1g39924 I 0.688
Pvit_14541 Pogona vitticeps Pvit_14541 I 0.688
Gfo_R008427 Geospiza fortis Gfo_R008427 I 0.688
ENSTGUG00000013121 Taeniopygia guttata ENSTGUG00000013121 I 0.688
NEMVEDRAFT_v1g123745 Nematostella vectensis NEMVEDRAFT_v1g123745 I 0.688
ENSPSIG00000012334 Pelodiscus sinensis ENSPSIG00000012334 I 0.688
NEMVEDRAFT_v1g123764 Nematostella vectensis NEMVEDRAFT_v1g123764 I 0.688
ENSFALG00000007255 Ficedula albicollis ENSFALG00000007255 I 0.688
ENSPFOG00000003903 Poecilia formosa ENSPFOG00000003903 I 0.687
ENSXMAG00000002833 Xiphophorus maculatus ENSXMAG00000002833 I 0.687
ASIS004942 Anopheles sinensis ASIS004942 I 0.686
estExt_fgenesh2_pg.C_4020005 Branchiostoma floridae estExt_fgenesh2_pg.C_4020005 I 0.686
Sakowv30000857m.g Saccoglossus kowalevskii Sakowv30000857m.g I 0.686
csin110741 Clonorchis sinensis csin110741 I 0.685
Brh_R004369 Buceros rhinoceros Brh_R004369 I 0.685
BTMF_0001812401 Brugia timori BTMF_0001812401 I 0.685
WUBG_03574 Wuchereria bancrofti WUBG_03574 I 0.685
OFLC_0001592701 Onchocerca flexuosa OFLC_0001592701 I 0.685
ACYPI33702 Acyrthosiphon pisum ACYPI33702 I 0.685
nAv.1.0.1.g07298 Acanthocheilonema viteae nAv.1.0.1.g07298 I 0.685
nLs.2.1.2.g09266 Litomosoides sigmodontis nLs.2.1.2.g09266 I 0.685
LOAG_07370 Loa loa LOAG_07370 I 0.685
WBGene00244660 Onchocerca volvulus WBGene00244660 I 0.685
nOo.2.0.1.g07753 Onchocerca ochengi nOo.2.0.1.g07753 I 0.685
ENSORLG00000017548 Oryzias latipes ENSORLG00000017548 I 0.684
HOXD4 Taeniopygia guttata ENSTGUG00000008959 I 0.684
HOXD4 Sus scrofa ENSSSCG00000015984 I 0.684
ALUE_0001569501 Ascaris lumbricoides ALUE_0001569501 I 0.684
hox4 Ciona intestinalis ENSCING00000006962 I 0.684
HOXA4 Taeniopygia guttata ENSTGUG00000002905 I 0.684
ENSNLEG00000017675 Nomascus leucogenys ENSNLEG00000017675 I 0.684
hoxd4.L Xenopus laevis XB-GENE-6466680 I 0.684
HOXB4 Homo sapiens ENSG00000182742 D 0.684
HOXA4 Canis familiaris ENSCAFG00000002948 I 0.684
Cmyd_10010791 Chelonia mydas Cmyd_10010791 I 0.684
HOXA4 Otolemur garnettii ENSOGAG00000028670 I 0.684
ENSP00000407978-D3 Bos grunniens ENSP00000407978-D3 I 0.684
AAA49756 Xenopus laevis AAA49756 I 0.684
HOXA4 Homo sapiens ENSG00000197576 D 0.684
ENSMPUG00000014070 Mustela putorius furo ENSMPUG00000014070 I 0.684
Gfo_R001383 Geospiza fortis Gfo_R001383 I 0.684
ENSMEUG00000007414 Macropus eugenii ENSMEUG00000007414 I 0.684
HOXC4 Canis familiaris ENSCAFG00000006611 I 0.684
HOXA4 Sus scrofa ENSSSCG00000016704 I 0.684
HOXA4 Felis catus ENSFCAG00000024158 I 0.684
LotgiG110972 Lottia gigantea LotgiG110972 I 0.684
ENSPANG00000000542 Papio anubis ENSPANG00000000542 I 0.684
ENSMMUG00000006533 Macaca mulatta ENSMMUG00000006533 I 0.684
HOXD4 Choloepus hoffmanni ENSCHOG00000004176 I 0.684
HOXA4 Choloepus hoffmanni ENSCHOG00000003332 I 0.684
ENSSTOG00000020156 Ictidomys tridecemlineatus ENSSTOG00000020156 I 0.684
ENSPANG00000010688 Papio anubis ENSPANG00000010688 I 0.684
ENSSTOG00000009734 Ictidomys tridecemlineatus ENSSTOG00000009734 I 0.684
ENSSTOG00000024606 Ictidomys tridecemlineatus ENSSTOG00000024606 I 0.684
Pvit_18300 Pogona vitticeps Pvit_18300 I 0.684
Gfo_R015842 Geospiza fortis Gfo_R015842 I 0.684
HOXA4 Tupaia belangeri ENSTBEG00000010665 I 0.684
HOXD4 Canis familiaris ENSCAFG00000013452 I 0.684
ENSSTOG00000029055 Ictidomys tridecemlineatus ENSSTOG00000029055 I 0.684
ENSNLEG00000002570 Nomascus leucogenys ENSNLEG00000002570 I 0.684
HOXB4 Canis familiaris ENSCAFG00000016849 I 0.684
HOXB4 Sus scrofa ENSSSCG00000017535 I 0.684
HOXB4 Felis catus ENSFCAG00000023225 I 0.684
HOXD4 Homo sapiens ENSG00000170166 D 0.684
HOXD4 Echinops telfairi ENSETEG00000019404 I 0.684
HOXD4 Dasypus novemcinctus ENSDNOG00000019805 I 0.684
HOXB4 Dasypus novemcinctus ENSDNOG00000039782 I 0.684
ENSCSAG00000002530 Chlorocebus sabaeus ENSCSAG00000002530 I 0.684
ENSCSAG00000005445 Chlorocebus sabaeus ENSCSAG00000005445 I 0.684
Pvi