fgeneshMC_pg.10_#_259 (Mucor circinelloides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgeneshMC_pg.10_#_259 T227564_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN

NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.681 0.439
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG

CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.681 0.439
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR

YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.681 0.439
YHP1
M10797_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.681 0.439
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR

YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.669 0.404
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR

YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.669 0.404
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.669 0.404
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.669 0.404
yox1
M02174_2.00
Schizosaccharomyces pombe
NNHHATDDNN

NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6057
0.617 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshMC_pg.10_#_259 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Mucor circinelloides TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RO3G_03673 Rhizopus oryzae RO3G_03673 I 0.863
fgeneshPB_pg.5__518 Phycomyces blakesleeanus fgeneshPB_pg.5__518 I 0.846
gw1.54.52.1 Phycomyces blakesleeanus gw1.54.52.1 I 0.790
RO3G_16317 Rhizopus oryzae RO3G_16317 I 0.724
gw1.4.1148.1 Mucor circinelloides gw1.4.1148.1 I 0.713
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.712
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.696
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.696
SPPG_01917 Spizellomyces punctatus SPPG_01917 I 0.696
PNEG_03146 Pneumocystis murina PNEG_03146 I 0.695
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I 0.695
gw1.16.189.1 Phycomyces blakesleeanus gw1.16.189.1 I 0.688
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.681
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.681
YHP1 Saccharomyces cerevisiae YDR451C D 0.681
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.681
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.681
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.679
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.679
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I 0.678
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I 0.678
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.674
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.671
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.670
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.669
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.669
17440_YML027W Saccharomyces paradoxus 17440_YML027W I 0.669
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.669
YOX1 Saccharomyces cerevisiae YML027W D 0.669
gw1.10.371.1 Mucor circinelloides gw1.10.371.1 I 0.664
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.664
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.664
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.664
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.664
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I 0.657
TPHA_0K00360 Tetrapisispora phaffii TPHA_0K00360 I 0.655
RO3G_04480 Rhizopus oryzae RO3G_04480 I 0.654
PIIN_05295 Piriformospora indica PIIN_05295 I 0.654
YALI0_E15510g Yarrowia lipolytica YALI0_E15510g I 0.649
SCHCODRAFT_257652 Schizophyllum commune SCHCODRAFT_257652 I 0.645
RO3G_14851 Rhizopus oryzae RO3G_14851 I 0.642
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.634
RO3G_01863 Rhizopus oryzae RO3G_01863 I 0.630
SPPG_04779 Spizellomyces punctatus SPPG_04779 I 0.629
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I 0.629
AGOS_AER314W Ashbya gossypii AGOS_AER314W I 0.629
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I 0.628
Scas_Contig641.12 Saccharomyces castellii Scas_Contig641.12 I 0.628
NCAS_0H02770 Naumovozyma castellii NCAS_0H02770 I 0.628
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.624
G647_08323 Cladophialophora carrionii G647_08323 I 0.621
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I 0.621
A1O7_09958 Cladophialophora yegresii A1O7_09958 I 0.621
Z518_06261 Rhinocladiella mackenziei Z518_06261 I 0.621
A1O3_10315 Capronia epimyces A1O3_10315 I 0.621
A1O1_06861 Capronia coronata A1O1_06861 I 0.621
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.618
RO3G_11070 Rhizopus oryzae RO3G_11070 N 0.618
SPOG_04875 Schizosaccharomyces cryophilus SPOG_04875 I 0.617
yox1 Schizosaccharomyces pombe SPBC21B10.13c D 0.617
SOCG_04925 Schizosaccharomyces octosporus SOCG_04925 I 0.617
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I 0.616
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.616
XP_002491722.1 Pichia pastoris XP_002491722.1 I 0.616
GLOINDRAFT_346743 Rhizophagus irregularis GLOINDRAFT_346743 I 0.616
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I 0.616
BN946_scf184983.g13 Trametes cinnabarina BN946_scf184983.g13 I 0.614
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.614
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.614
PHLGIDRAFT_184498 Phlebiopsis gigantea PHLGIDRAFT_184498 I 0.614
PHACADRAFT_258345 Phanerochaete carnosa PHACADRAFT_258345 I 0.614
gw1.6.914.1 Mucor circinelloides gw1.6.914.1 I 0.613
Z517_12283 Fonsecaea pedrosoi Z517_12283 I 0.613
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I 0.612
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.612
GLOTRDRAFT_127900 Gloeophyllum trabeum GLOTRDRAFT_127900 I 0.612
FOMPIDRAFT_1031831 Fomitopsis pinicola FOMPIDRAFT_1031831 I 0.612
FIBRA_03525 Fibroporia radiculosa FIBRA_03525 I 0.612
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.612
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.612
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.612
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.612
SJAG_01157 Schizosaccharomyces japonicus SJAG_01157 I 0.611
Z519_06193 Cladophialophora bantiana Z519_06193 I 0.609
SPPG_03931 Spizellomyces punctatus SPPG_03931 I 0.609
PV04_10601 Capronia semiimmersa PV04_10601 I 0.609
A1O5_07631 Cladophialophora psammophila A1O5_07631 I 0.609
CD36_70900 Candida dubliniensis CD36_70900 I 0.607
CaO19.7017 Candida albicans CaO19.7017 I 0.607
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.607
G210_2310 Candida maltosa G210_2310 I 0.607
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.607
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.607
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.607
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.607
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.607
CTRG_04888 Candida tropicalis CTRG_04888 I 0.607
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.607
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.607
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.607
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.604
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I 0.602