CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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fgeneshMC_pg.4_#_986
(
Mucor circinelloides
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgeneshMC_pg.4_#_986
T227577_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAD26261
M02055_2.00
Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN
PBM
Weirauch et al.(2014)
pTH6363
0.644
0.456
NEMVEDRAFT_v1g105595
M02143_2.00
Nematostella vectensis
NTWATWRN
NYWATWAN
PBM
Weirauch et al.(2014)
pTH5503
0.621
0.421
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshMC_pg.4_#_986
Homeodomain
58
114
KAKRKRISPAQYNRLMEIFDQTDTPSSEIRENLAIELNMTKREVQVWFQNRRAKMNR
Links
Other
Homeodomain
family TFs
Other
Mucor circinelloides
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgeneshMC_pg.1_#_1591
Mucor circinelloides
fgeneshMC_pg.1_#_1591
I
0.858
fgeneshPB_pg.18__155
Phycomyces blakesleeanus
fgeneshPB_pg.18__155
I
0.826
SPPG_05107
Spizellomyces punctatus
SPPG_05107
I
0.739
GLOINDRAFT_21145
Rhizophagus irregularis
GLOINDRAFT_21145
I
0.725
fgeneshMC_pg.1_#_69
Mucor circinelloides
fgeneshMC_pg.1_#_69
I
0.724
fgeneshPB_pg.6__195
Phycomyces blakesleeanus
fgeneshPB_pg.6__195
I
0.720
fgeneshMC_pg.1_#_125
Mucor circinelloides
fgeneshMC_pg.1_#_125
I
0.720
MVLG_00113
Microbotryum violaceum
MVLG_00113
I
0.705
RO3G_02291
Rhizopus oryzae
RO3G_02291
I
0.695
PGTG_00338
Puccinia graminis
PGTG_00338
I
0.685
PTTG_07330
Puccinia triticina
PTTG_07330
I
0.685
estExt_fgeneshDP_pg.C_350041
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_350041
I
0.683
warA
Dictyostelium discoideum
DDB_G0291075
I
0.683
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
0.683
E5Q_01806
Mixia osmundae
E5Q_01806
I
0.665
RHTO_02593
Rhodosporidium toruloides
RHTO_02593
I
0.661
M413DRAFT_413744
Hebeloma cylindrosporum
M413DRAFT_413744
I
0.658
CY34DRAFT_106181
Suillus luteus
CY34DRAFT_106181
I
0.658
M378DRAFT_8263
Amanita muscaria
M378DRAFT_8263
I
0.658
Eint_031070
Encephalitozoon intestinalis
Eint_031070
I
0.656
NCER_100211
Nosema ceranae
NCER_100211
I
0.655
NAPIS_ORF00184
Nosema apis
NAPIS_ORF00184
I
0.654
POSPLDRAFT_98870
Postia placenta
POSPLDRAFT_98870
I
0.650
PHLGIDRAFT_55548
Phlebiopsis gigantea
PHLGIDRAFT_55548
I
0.650
PHACADRAFT_257545
Phanerochaete carnosa
PHACADRAFT_257545
I
0.650
fgenesh1_pg.C_scaffold_15000074
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_15000074
I
0.650
M408DRAFT_258951
Serendipita vermifera
M408DRAFT_258951
I
0.648
M407DRAFT_4599
Tulasnella calospora
M407DRAFT_4599
I
0.647
PAXRUDRAFT_10369
Paxillus rubicundulus
PAXRUDRAFT_10369
I
0.646
SERLA73DRAFT_72643
Serpula lacrymans
SERLA73DRAFT_72643
I
0.646
YALI0_F16852g
Yarrowia lipolytica
YALI0_F16852g
I
0.646
NBO_85g0005
Nosema bombycis
NBO_85g0005
I
0.646
PLEOSDRAFT_173849
Pleurotus ostreatus
PLEOSDRAFT_173849
I
0.646
PIIN_02203
Piriformospora indica
PIIN_02203
I
0.646
NBO_11g0012
Nosema bombycis
NBO_11g0012
I
0.646
K443DRAFT_127593
Laccaria amethystina
K443DRAFT_127593
I
0.646
LACBIDRAFT_293988
Laccaria bicolor
LACBIDRAFT_293988
I
0.646
GALMADRAFT_211191
Galerina marginata
GALMADRAFT_211191
I
0.646
CC1G_01962
Coprinopsis cinerea
CC1G_01962
I
0.646
RO3G_03200
Rhizopus oryzae
RO3G_03200
I
0.646
Moror_6758
Moniliophthora roreri
Moror_6758
I
0.646
JAAARDRAFT_47621
Jaapia argillacea
JAAARDRAFT_47621
I
0.646
EROM_031050
Encephalitozoon romaleae
EROM_031050
I
0.644
EHEL_031090
Encephalitozoon hellem
EHEL_031090
I
0.644
CAD26261
Encephalitozoon cuniculi
CAD26261
D
0.644
THOM_0497
Trachipleistophora hominis
THOM_0497
I
0.644
VCUG_00708
Vavraia culicis
VCUG_00708
I
0.644
M896_030550
Ordospora colligata
M896_030550
I
0.644
NCER_100315
Nosema ceranae
NCER_100315
I
0.638
NAPIS_ORF00325
Nosema apis
NAPIS_ORF00325
I
0.638
NERG_00880
Nematocida sp
NERG_00880
I
0.635
BOTBODRAFT_214576
Botryobasidium botryosum
BOTBODRAFT_214576
I
0.635
NEPG_01845
Nematocida parisii ertm1
NEPG_01845
I
0.635
H311_05138
Anncaliia algerae
H311_05138
I
0.633
NBO_6g0031
Nosema bombycis
NBO_6g0031
I
0.626
NEMVEDRAFT_v1g105595
Nematostella vectensis
NEMVEDRAFT_v1g105595
D
0.621
J056_004115
Wallemia ichthyophaga
J056_004115
I
0.621
WALSEDRAFT_59197
Wallemia sebi
WALSEDRAFT_59197
I
0.621
NDAI_0B03290
Naumovozyma dairenensis
NDAI_0B03290
I
0.619
M407DRAFT_11655
Tulasnella calospora
M407DRAFT_11655
I
0.614
RO3G_08777
Rhizopus oryzae
RO3G_08777
I
0.613
KNAG_0A05600
Kazachstania naganishii
KNAG_0A05600
I
0.613
CY34DRAFT_109842
Suillus luteus
CY34DRAFT_109842
I
0.607
Scas_Contig613.11
Saccharomyces castellii
Scas_Contig613.11
I
0.603
NCAS_0B05980
Naumovozyma castellii
NCAS_0B05980
I
0.603