CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgeneshNG_pg.scaffold_64000050
(
Naegleria gruberi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgeneshNG_pg.scaffold_64000050
T227584_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshNG_pg.scaffold_64000050
Homeodomain
4
60
AQKRTLPKEAVEQLKEWLYDHLFHPYPSDAQKNQLSNQTSLEMKSINNWFINARRRL
Links
Other
Homeodomain
family TFs
Other
Naegleria gruberi
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VCUG_01289
Vavraia culicis
VCUG_01289
N
0.685
NCER_101892
Nosema ceranae
NCER_101892
N
0.665
H311_02800
Anncaliia algerae
H311_02800
N
0.662
ENSCSAG00000000068
Chlorocebus sabaeus
ENSCSAG00000000068
I
0.628
7936_YGL096W
Saccharomyces mikatae
7936_YGL096W
I
0.619
SAKL0A05610g
Lachancea kluyveri
SAKL0A05610g
I
0.615
BN7_5448
Wickerhamomyces ciferrii
BN7_5448
N
0.609
Kwal_11092
Kluyveromyces waltii
Kwal_11092
I
0.601