CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.4__239
(
Phycomyces blakesleeanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgeneshPB_pg.4__239
T227590_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pal-1
M02183_2.00
Caenorhabditis elegans
GYAATWAA
TTWATTRC
PBM
Weirauch et al.(2014)
pTH6016
0.617
0.351
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.4__239
Homeodomain
8
64
HKKRMMLKPYQYKVLQDHFSANPKPDARVYIDIASRLNVSITKIKNWFQNRRAKARK
Links
Other
Homeodomain
family TFs
Other
Phycomyces blakesleeanus
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy