fgeneshPB_pg.5__518 (Phycomyces blakesleeanus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgeneshPB_pg.5__518 T227593_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.685 0.439
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.685 0.439
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.685 0.439
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.685 0.439
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.673 0.439
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.673 0.439
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.673 0.439
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.673 0.439
yox1
M02174_2.00 		Schizosaccharomyces pombe
NNHHATDDNN
NNHHATDDNN		 PBM
Weirauch et al.(2014)
pTH6057 		0.617 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.5__518 Homeodomain 150 206

Links

Other Homeodomain family TFs
Other Phycomyces blakesleeanus TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgeneshMC_pg.10_#_259 Mucor circinelloides fgeneshMC_pg.10_#_259 I 0.846
RO3G_03673 Rhizopus oryzae RO3G_03673 I 0.846
gw1.54.52.1 Phycomyces blakesleeanus gw1.54.52.1 I 0.803
gw1.4.1148.1 Mucor circinelloides gw1.4.1148.1 I 0.712
RO3G_16317 Rhizopus oryzae RO3G_16317 I 0.711
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.708
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.696
SPPG_01917 Spizellomyces punctatus SPPG_01917 I 0.695
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.685
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.685
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.685
YHP1 Saccharomyces cerevisiae YDR451C D 0.685
gw1.16.189.1 Phycomyces blakesleeanus gw1.16.189.1 I 0.685
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.685
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.679
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.679
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.679
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I 0.679
PNEG_03146 Pneumocystis murina PNEG_03146 I 0.679
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I 0.678
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.674
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I 0.674
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.673
17440_YML027W Saccharomyces paradoxus 17440_YML027W I 0.673
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.673
YOX1 Saccharomyces cerevisiae YML027W D 0.673
TPHA_0K00360 Tetrapisispora phaffii TPHA_0K00360 I 0.672
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.669
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.669
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.665
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.664
gw1.10.371.1 Mucor circinelloides gw1.10.371.1 I 0.664
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.664
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.664
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.659
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I 0.657
PIIN_05295 Piriformospora indica PIIN_05295 I 0.654
RO3G_04480 Rhizopus oryzae RO3G_04480 I 0.654
YALI0_E15510g Yarrowia lipolytica YALI0_E15510g I 0.653
RO3G_01863 Rhizopus oryzae RO3G_01863 I 0.646
RO3G_14851 Rhizopus oryzae RO3G_14851 I 0.642
gw1.6.914.1 Mucor circinelloides gw1.6.914.1 I 0.629
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.629
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.627
SCHCODRAFT_257652 Schizophyllum commune SCHCODRAFT_257652 I 0.625
SPPG_04779 Spizellomyces punctatus SPPG_04779 I 0.625
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.624
CD36_70900 Candida dubliniensis CD36_70900 I 0.623
CaO19.7017 Candida albicans CaO19.7017 I 0.623
G210_2310 Candida maltosa G210_2310 I 0.623
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.623
CTRG_04888 Candida tropicalis CTRG_04888 I 0.623
A1O3_10315 Capronia epimyces A1O3_10315 I 0.621
G647_08323 Cladophialophora carrionii G647_08323 I 0.621
A1O7_09958 Cladophialophora yegresii A1O7_09958 I 0.621
A1O1_06861 Capronia coronata A1O1_06861 I 0.621
Z518_06261 Rhinocladiella mackenziei Z518_06261 I 0.621
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I 0.621
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I 0.621
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.619
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.619
RO3G_11070 Rhizopus oryzae RO3G_11070 N 0.618
Scas_Contig641.12 Saccharomyces castellii Scas_Contig641.12 I 0.617
NCAS_0H02770 Naumovozyma castellii NCAS_0H02770 I 0.617
SOCG_04925 Schizosaccharomyces octosporus SOCG_04925 I 0.617
SPOG_04875 Schizosaccharomyces cryophilus SPOG_04875 I 0.617
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.617
yox1 Schizosaccharomyces pombe SPBC21B10.13c D 0.617
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.614
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.614
Z517_12283 Fonsecaea pedrosoi Z517_12283 I 0.613
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.613
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.613
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I 0.613
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.613
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I 0.613
GLOINDRAFT_346743 Rhizophagus irregularis GLOINDRAFT_346743 I 0.613
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I 0.612
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.612
AGOS_AER314W Ashbya gossypii AGOS_AER314W I 0.612
SJAG_01157 Schizosaccharomyces japonicus SJAG_01157 I 0.611
SPPG_03931 Spizellomyces punctatus SPPG_03931 I 0.610
PV04_10601 Capronia semiimmersa PV04_10601 I 0.609
Z519_06193 Cladophialophora bantiana Z519_06193 I 0.609
A1O5_07631 Cladophialophora psammophila A1O5_07631 I 0.609
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.608
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.608
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.608
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.607
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.607
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.607
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.607
KNAG_0C02770 Kazachstania naganishii KNAG_0C02770 I 0.606
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.604
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I 0.602
XP_002491722.1 Pichia pastoris XP_002491722.1 I 0.600
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I 0.600