CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.16.189.1
(
Phycomyces blakesleeanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gw1.16.189.1
T227613_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CNG03450
M02066_2.00
Cryptococcus neoformans
NTTAATWDN
NHWATTAAN
PBM
Weirauch et al.(2014)
pTH5724
0.657
0.526
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.16.189.1
Homeodomain
1
57
KAKRKRASAPQLAVLNRVFSQTYFPSTELRIDLGKQLNMSPRTVQIWFQNKRQALRT
Links
Other
Homeodomain
family TFs
Other
Phycomyces blakesleeanus
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.10.371.1
Mucor circinelloides
gw1.10.371.1
I
0.836
RO3G_04480
Rhizopus oryzae
RO3G_04480
I
0.827
RO3G_16317
Rhizopus oryzae
RO3G_16317
I
0.823
RO3G_14851
Rhizopus oryzae
RO3G_14851
I
0.815
RO3G_01863
Rhizopus oryzae
RO3G_01863
I
0.781
SCHCODRAFT_257652
Schizophyllum commune
SCHCODRAFT_257652
I
0.773
RO3G_11070
Rhizopus oryzae
RO3G_11070
N
0.769
gw1.6.914.1
Mucor circinelloides
gw1.6.914.1
I
0.759
GLOINDRAFT_346743
Rhizophagus irregularis
GLOINDRAFT_346743
I
0.758
WALSEDRAFT_62198
Wallemia sebi
WALSEDRAFT_62198
N
0.754
SPPG_03931
Spizellomyces punctatus
SPPG_03931
I
0.753
J056_002014
Wallemia ichthyophaga
J056_002014
N
0.748
FIBRA_03525
Fibroporia radiculosa
FIBRA_03525
I
0.743
FOMPIDRAFT_1031831
Fomitopsis pinicola
FOMPIDRAFT_1031831
I
0.743
PHACADRAFT_258345
Phanerochaete carnosa
PHACADRAFT_258345
I
0.741
PHLGIDRAFT_184498
Phlebiopsis gigantea
PHLGIDRAFT_184498
I
0.741
GLOTRDRAFT_127900
Gloeophyllum trabeum
GLOTRDRAFT_127900
I
0.741
BN946_scf184983.g13
Trametes cinnabarina
BN946_scf184983.g13
I
0.741
gw1.26.106.1
Phycomyces blakesleeanus
gw1.26.106.1
I
0.731
SPPG_06166
Spizellomyces punctatus
SPPG_06166
I
0.725
PLEOSDRAFT_1112690
Pleurotus ostreatus
PLEOSDRAFT_1112690
N
0.717
PILCRDRAFT_101484
Piloderma croceum
PILCRDRAFT_101484
N
0.716
AGABI2DRAFT_192433
Agaricus bisporus
AGABI2DRAFT_192433
N
0.716
M378DRAFT_12738
Amanita muscaria
M378DRAFT_12738
N
0.705
EuGene3000454
Heterobasidion annosum
EuGene3000454
N
0.702
HETIRDRAFT_169178
Heterobasidion irregulare
HETIRDRAFT_169178
N
0.702
Moror_6850
Moniliophthora roreri
Moror_6850
N
0.696
K443DRAFT_105165
Laccaria amethystina
K443DRAFT_105165
I
0.692
fgeneshMC_pg.10_#_259
Mucor circinelloides
fgeneshMC_pg.10_#_259
I
0.688
RO3G_03673
Rhizopus oryzae
RO3G_03673
I
0.685
M413DRAFT_24511
Hebeloma cylindrosporum
M413DRAFT_24511
N
0.685
fgeneshPB_pg.5__518
Phycomyces blakesleeanus
fgeneshPB_pg.5__518
I
0.685
PISMIDRAFT_217828
Pisolithus microcarpus
PISMIDRAFT_217828
N
0.684
CY34DRAFT_611334
Suillus luteus
CY34DRAFT_611334
N
0.684
CC1G_01991
Coprinopsis cinerea
CC1G_01991
N
0.684
GALMADRAFT_540101
Galerina marginata
GALMADRAFT_540101
N
0.684
K443DRAFT_82097
Laccaria amethystina
K443DRAFT_82097
N
0.684
LACBIDRAFT_324166
Laccaria bicolor
LACBIDRAFT_324166
N
0.684
PAXRUDRAFT_823153
Paxillus rubicundulus
PAXRUDRAFT_823153
N
0.681
L804_03528
Cryptococcus gattii
L804_03528
I
0.657
CNG03450
Cryptococcus neoformans
CNG03450
D
0.657
LACBIDRAFT_297628
Laccaria bicolor
LACBIDRAFT_297628
N
0.653
gw1.54.52.1
Phycomyces blakesleeanus
gw1.54.52.1
I
0.634
PV05_02773
Exophiala xenobiotica
PV05_02773
I
0.634
PV11_06012
Exophiala sideris
PV11_06012
I
0.634
fgeneshTM_pg.2_#_419
Tremella mesenterica
fgeneshTM_pg.2_#_419
I
0.633
PV06_07195
Exophiala oligosperma
PV06_07195
I
0.626
PV08_06661
Exophiala spinifera
PV08_06661
I
0.626
JAAARDRAFT_44019
Jaapia argillacea
JAAARDRAFT_44019
N
0.624
HETIRDRAFT_431289
Heterobasidion irregulare
HETIRDRAFT_431289
N
0.614
GLOTRDRAFT_134845
Gloeophyllum trabeum
GLOTRDRAFT_134845
N
0.611
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
0.606
BOTBODRAFT_56815
Botryobasidium botryosum
BOTBODRAFT_56815
N
0.605
PV07_12240
Cladophialophora immunda
PV07_12240
I
0.600
BGHDH14_bgh01184
Blumeria graminis
BGHDH14_bgh01184
I
0.600