CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.23.557.1
(
Fragilariopsis cylindrus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gw1.23.557.1
T227617_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.23.557.1
Homeodomain
10
56
KTWLLSPEHFTHPYPTPQDQVMLMQKTGIDKKQLKNWFTNARRRIWK
Links
Other
Homeodomain
family TFs
Other
Fragilariopsis cylindrus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_EG01287
Phaeodactylum tricornutum
Phatr3_EG01287
N
0.808
CapteG207287
Capitella teleta
CapteG207287
N
0.668
Ocbimv22005149m.g
Octopus bimaculoides
Ocbimv22005149m.g
N
0.658
LotgiG111066
Lottia gigantea
LotgiG111066
N
0.658
HelroG148509
Helobdella robusta
HelroG148509
N
0.656
PK11392.1
Cannabis sativa
PK11392.1
N
0.656
CGI_10008335
Crassostrea gigas
CGI_10008335
N
0.650
M422DRAFT_215883
Sphaerobolus stellatus
M422DRAFT_215883
N
0.639
M422DRAFT_216079
Sphaerobolus stellatus
M422DRAFT_216079
N
0.639
M407DRAFT_19124
Tulasnella calospora
M407DRAFT_19124
N
0.638
e_gw1.484.13.1
Dictyostelium purpureum
e_gw1.484.13.1
N
0.635
O9G_002691
Rozella allomycis
O9G_002691
N
0.632
HMPREF1120_03855
Exophiala dermatitidis
HMPREF1120_03855
N
0.629
CapteG218681
Capitella teleta
CapteG218681
N
0.623
SERLA73DRAFT_156557
Serpula lacrymans
SERLA73DRAFT_156557
N
0.617
CHGG_03334
Chaetomium globosum
CHGG_03334
N
0.609