gw.45.264.1 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gw.45.264.1 T227650_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M01849_2.00 		Homo sapiens
NNNRMTNDN
NHNAKYNNN		 PBM
Weirauch et al.(2014)
pTH6494 		0.734 0.754
ENSTNIG00000004116
M02105_2.00 		Tetraodon nigroviridis
TTAATTAG
CTAATTAA		 PBM
Weirauch et al.(2014)
pTH6772 		0.658 0.561
SNAPOd2T00006620001
M02231_2.00 		Oikopleura dioica
NTAATTRN
NYAATTAN		 PBM
Weirauch et al.(2014)
pTH5666 		0.615 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.45.264.1 Homeodomain 1 57

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
snap_masked-nMf.1.1.scaf16341-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf16341-processed-gene-0.2 I 0.793
HPLM_0000198901 Haemonchus placei HPLM_0000198901 I 0.755
ZFHX3 Homo sapiens ENSG00000140836 D 0.734
ENSTNIG00000004116 Tetraodon nigroviridis ENSTNIG00000004116 D 0.658
ML03151a Mnemiopsis leidyi ML03151a I 0.645
EHEL_060450 Encephalitozoon hellem EHEL_060450 N 0.637
SLOPH_445 Spraguea lophii SLOPH_445 I 0.637
CAD25410 Encephalitozoon cuniculi CAD25410 N 0.625
HNAJ_0000200501 Hymenolepis nana HNAJ_0000200501 I 0.624
MhA1_Contig705.frz3.gene5 Meloidogyne hapla MhA1_Contig705.frz3.gene5 I 0.620
SMU15027124 Schmidtea mediterranea SMU15027124 I 0.620
BXY_1075500 Bursaphelenchus xylophilus BXY_1075500 I 0.620
GPLIN_000670100 Globodera pallida GPLIN_000670100 I 0.619
SNAPOd2T00006620001 Oikopleura dioica SNAPOd2T00006620001 D 0.615
SNAPOd2T00007704001 Oikopleura dioica SNAPOd2T00007704001 I 0.613
DI09_14p30 Microsporidia sp DI09_14p30 I 0.612
SMU15036820 Schmidtea mediterranea SMU15036820 I 0.610
AMAG_01902 Allomyces macrogynus AMAG_01902 N 0.607
AMAG_00381 Allomyces macrogynus AMAG_00381 N 0.607
Minc01927 Meloidogyne incognita Minc01927 I 0.604
D918_00056 Trichuris suis D918_00056 I 0.604
genemark-nMf.1.1.scaf01244-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf01244-processed-gene-0.3 I 0.604
HCOI00498900 Haemonchus contortus HCOI00498900 I 0.602
HCOI00735900 Haemonchus contortus HCOI00735900 I 0.602
OESDEN_05340 Oesophagostomum dentatum OESDEN_05340 I 0.602
TCNE_0001679801 Toxocara canis TCNE_0001679801 I 0.602
TELCIR_21756 Teladorsagia circumcincta TELCIR_21756 I 0.602
snap_masked-nMf.1.1.scaf03468-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf03468-processed-gene-0.2 I 0.602
SMUV_0000690201 Syphacia muris SMUV_0000690201 I 0.602
NECAME_04046 Necator americanus NECAME_04046 I 0.602
SBAD_0000768301 Soboliphyme baturini SBAD_0000768301 I 0.602
HPLM_0001065001 Haemonchus placei HPLM_0001065001 I 0.602
ASIM_0001791701 Anisakis simplex ASIM_0001791701 I 0.602
CRE04711 Caenorhabditis remanei CRE04711 I 0.602
CBN12902 Caenorhabditis brenneri CBN12902 I 0.602
NBO_278g0001 Nosema bombycis NBO_278g0001 N 0.602
EVEC_0000705501 Enterobius vermicularis EVEC_0000705501 I 0.602
SMAR010756 Strigamia maritima SMAR010756 I 0.602
ceh-10 Caenorhabditis elegans WBGene00000435 I 0.602
CBG09085 Caenorhabditis briggsae CBG09085 I 0.602
DICVIV_10187 Dictyocaulus viviparus DICVIV_10187 I 0.602
ASU_05926 Ascaris suum ASU_05926 I 0.602
ANCCEY_09526 Ancylostoma ceylanicum ANCCEY_09526 I 0.602
ACAC_0000855001 Angiostrongylus cantonensis ACAC_0000855001 I 0.602
ANCCAN_10114 Ancylostoma caninum ANCCAN_10114 I 0.602
scaffold20-EXSNAP2012.2 Pristionchus exspectatus scaffold20-EXSNAP2012.2 I 0.599
L898_g668 Steinernema monticolum L898_g668 I 0.599
L889_g31709 Steinernema feltiae L889_g31709 I 0.599
L596_g17749 Steinernema carpocapsae L596_g17749 I 0.599
L892_g1613 Steinernema scapterisci L892_g1613 I 0.599
L893_g1173 Steinernema glaseri L893_g1173 I 0.599
MDOA000990 Musca domestica MDOA000990 I 0.599
MDOA003070 Musca domestica MDOA003070 I 0.599
LCUP017283 Lucilia cuprina LCUP017283 I 0.599