gw.45.264.1 (Branchiostoma floridae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gw.45.264.1 T227650_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M01849_2.00 		Homo sapiens
NNNRMTNDN
NHNAKYNNN		 PBM
Weirauch et al.(2014)
pTH6494 		0.734 0.754
ENSTNIG00000004116
M02105_2.00 		Tetraodon nigroviridis
TTAATTAG
CTAATTAA		 PBM
Weirauch et al.(2014)
pTH6772 		0.658 0.561
SNAPOd2T00006620001
M02231_2.00 		Oikopleura dioica
NTAATTRN
NYAATTAN		 PBM
Weirauch et al.(2014)
pTH5666 		0.615 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.45.264.1 Homeodomain 1 57

Links

Other Homeodomain family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action