Ocbimv22009013m.g (Octopus bimaculoides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ocbimv22009013m.g T227782_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dve
M03837_2.00 		Drosophila melanogaster
VHTAATTADB
VHTAATTADB		 SELEX
Nitta et al.(2015)
dve_1 		0.644 0.649
dve
M03838_2.00 		Drosophila melanogaster
TAATTWATKC
GMATWAATTA		 SELEX
Nitta et al.(2015)
dve_2 		0.644 0.649
dve
M03839_2.00 		Drosophila melanogaster
YHATTATGYTAATKA
TMATTARCATAATDR		 SELEX
Nitta et al.(2015)
dve_3 		0.644 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22009013m.p Homeodomain 170 237
Ocbimv22009013m.p Homeodomain 530 598

Links

Other Homeodomain family TFs
Other Octopus bimaculoides TFs

Invalid Input OrderBy

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action