Ocbimv22027669m.g (Octopus bimaculoides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ocbimv22027669m.g T227825_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ara
M06518_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.808 0.877
caup
M06519_2.00
Drosophila melanogaster
WAACA

TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.808 0.877
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN

NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.808 0.877
ara
M06314_2.00
Drosophila melanogaster
DWWACA

TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.808 0.877
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA

TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.808 0.877
caup
M06316_2.00
Drosophila melanogaster
NDDACA

TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.808 0.877
Irx2
M00386_2.00
Mus musculus
NNDACAHNN

NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.800 0.842
Irx5
M00455_2.00
Mus musculus
NNNDACAHN

NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.800 0.842
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.800 0.842
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.800 0.842
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN

NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.800 0.842
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY

RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.800 0.842
Irx4
M00416_2.00
Mus musculus
NNNDAMAH

DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.788 0.877
Irx6
M00456_2.00
Mus musculus
NNDAHWN

NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.776 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22027669m.p Homeodomain 7 66

Links

Other Homeodomain family TFs
Other Octopus bimaculoides TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AFUA_3G12180 Aspergillus fumigatus CADAFUAG00005119 N 0.000
PTRG_02939 Pyrenophora triticirepentis PTRG_02939 N 0.000
PFICI_01986 Pestalotiopsis fici PFICI_01986 N 0.000
DOTSEDRAFT_147401 Dothistroma septosporum DOTSEDRAFT_147401 N 0.000
COCVIDRAFT_104890 Bipolaris victoriae COCVIDRAFT_104890 N 0.000
COCSADRAFT_122027 Bipolaris sorokiniana COCSADRAFT_122027 N 0.000
COCMIDRAFT_94654 Bipolaris oryzae COCMIDRAFT_94654 N 0.000
COCCADRAFT_90843 Bipolaris zeicola COCCADRAFT_90843 N 0.000
COCC4DRAFT_167760 Bipolaris maydis COCC4DRAFT_167760 N 0.000
ANIA_05052 Aspergillus nidulans CADANIAG00005337 N 0.000
TSTA_096880 Talaromyces stipitatus TSTA_096880 N 0.000