Sakowv30000867m.g (Saccoglossus kowalevskii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Sakowv30000867m.g T227861_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hoxa6
M00494_2.00 		Mus musculus
NWWATKRNN
NNYMATWWN		 PBM
Berger et al.(2008)
Hoxa6_1040 		0.266 1.000
HOXA6
M04974_2.00 		Homo sapiens
NNTAATKRVN
NBYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX 		0.266 1.000
HOXA6
M04975_2.00 		Homo sapiens
NNTAATKRBN
NVYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1 		0.266 1.000
HOXA6
M04976_2.00 		Homo sapiens
NTAAYGRY
RYCRTTAN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2 		0.266 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23946472_peptide Homeodomain 149 182

Links

Other Homeodomain family TFs
Other Saccoglossus kowalevskii TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HOXB8 Monodelphis domestica ENSMODG00000009593 N 0.761
WUBG_08134 Wuchereria bancrofti WUBG_08134 N 0.755
EEL_0000283301 Elaeophora elaphi EEL_0000283301 N 0.755
L893_g7450 Steinernema glaseri L893_g7450 N 0.755
Hoxb8 Mus musculus ENSMUSG00000056648 D 0.743
PXEA_0000194701 Protopolystoma xenopodis PXEA_0000194701 N 0.735
HPLM_0001305101 Haemonchus placei HPLM_0001305101 N 0.730
AFUN010407 Anopheles funestus AFUN010407 N 0.729
SMTD_0002268201 Schistosoma mattheei SMTD_0002268201 N 0.722
TELCIR_25656 Teladorsagia circumcincta TELCIR_25656 N 0.722
L898_g696 Steinernema monticolum L898_g696 N 0.722
TELCIR_03058 Teladorsagia circumcincta TELCIR_03058 N 0.722
ANCCAN_01052 Ancylostoma caninum ANCCAN_01052 N 0.722
ACOC_0000018801 Angiostrongylus costaricensis ACOC_0000018801 N 0.722
ACAC_0001096101 Angiostrongylus cantonensis ACAC_0001096101 N 0.722
Sjc_0026350 Schistosoma japonicum Sjc_0026350 N 0.722
HPBE_0000692601 Heligmosomoides bakeri HPBE_0000692601 N 0.704
MESCA004913 Megaselia scalaris MESCA004913 N 0.697
MhA1_Contig303.frz3.gene9 Meloidogyne hapla MhA1_Contig303.frz3.gene9 N 0.662
genemark-nMf.1.1.scaf08601-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf08601-processed-gene-0.1 N 0.651
BGLB005976 Biomphalaria glabrata BGLB005976 I 0.650
OFLC_0001568201 Onchocerca flexuosa OFLC_0001568201 I 0.650
Crx Mus musculus ENSMUSG00000041578 D 0.647
nDi.2.2.2.g11780 Dirofilaria immitis nDi.2.2.2.g11780 I 0.645
FVEG_06689 Fusarium verticillioides FVEG_06689 N 0.644
MhA1_Contig290.frz3.gene10 Meloidogyne hapla MhA1_Contig290.frz3.gene10 I 0.644
Otx2 Mus musculus ENSMUSG00000021848 D 0.644
LDEC010767 Leptinotarsa decemlineata LDEC010767 I 0.643
AALB000327 Anopheles albimanus AALB000327 I 0.643
ACHR004287 Anopheles christyi ACHR004287 I 0.643
e_gw.85.119.1 Branchiostoma floridae e_gw.85.119.1 N 0.643
ADIR006768 Anopheles dirus ADIR006768 I 0.643
AARA005138 Anopheles arabiensis AARA005138 I 0.643
e_gw.543.9.1 Branchiostoma floridae e_gw.543.9.1 N 0.643
GB42226 Apis mellifera GB42226 I 0.643
GB40331 Apis mellifera GB40331 I 0.643
ISCW017713 Ixodes scapularis ISCW017713 I 0.643
ACEP26487 Atta cephalotes ACEP26487 I 0.643
AFUN001295 Anopheles funestus AFUN001295 I 0.643
SINV23302 Solenopsis invicta SINV23302 I 0.643
e_gw.814.10.1 Branchiostoma floridae e_gw.814.10.1 I 0.643
AEPI004828 Anopheles epiroticus AEPI004828 I 0.643
ANCDUO_09759 Ancylostoma duodenale ANCDUO_09759 I 0.643
AQUA000678 Anopheles quadriannulatus AQUA000678 I 0.643
ENSMEUG00000002781 Macropus eugenii ENSMEUG00000002781 I 0.643
CGOC_0000387301 Cylicostephanus goldi CGOC_0000387301 I 0.643
ENSCING00000013809 Ciona intestinalis ENSCING00000013809 I 0.643
AMIN006279 Anopheles minimus AMIN006279 I 0.643
BGLB001705 Biomphalaria glabrata BGLB001705 I 0.643
AMAM009154 Anopheles maculatus AMAM009154 I 0.643
AMEC016887 Anopheles melas AMEC016887 I 0.643
GPUH_0000555401 Gongylonema pulchrum GPUH_0000555401 N 0.643
Pitx1 Mus musculus ENSMUSG00000021506 D 0.640
CLEC007143 Cimex lectularius CLEC007143 I 0.636
PXEA_0000709901 Protopolystoma xenopodis PXEA_0000709901 I 0.636
LCUP010259 Lucilia cuprina LCUP010259 I 0.636
RPRC011667 Rhodnius prolixus RPRC011667 I 0.636
EVEC_0000238601 Enterobius vermicularis EVEC_0000238601 I 0.635
L898_g16919 Steinernema monticolum L898_g16919 N 0.635
TCNE_0000805901 Toxocara canis TCNE_0000805901 I 0.635
GPLIN_001127900 Globodera pallida GPLIN_001127900 I 0.632
ENSTGUG00000004229 Taeniopygia guttata ENSTGUG00000004229 I 0.630
PXEA_0001806501 Protopolystoma xenopodis PXEA_0001806501 N 0.630
D915_08446 Fasciola hepatica D915_08446 I 0.630
GPLIN_000434400 Globodera pallida GPLIN_000434400 I 0.629
A_07699 Schistosoma haematobium A_07699 I 0.629
SCUD_0000012401 Schistosoma curassoni SCUD_0000012401 I 0.629
SMTD_0001421101 Schistosoma mattheei SMTD_0001421101 I 0.629
Sjc_0051960 Schistosoma japonicum Sjc_0051960 I 0.629
SROB_0000845601 Schistosoma rodhaini SROB_0000845601 I 0.629
MESCA012524 Megaselia scalaris MESCA012524 I 0.629
Smp_150810 Schistosoma mansoni Smp_150810 I 0.629
MESCA003695 Megaselia scalaris MESCA003695 I 0.627
AMEC011816 Anopheles melas AMEC011816 I 0.627
Pitx3 Mus musculus ENSMUSG00000025229 D 0.627
PITX1 Homo sapiens ENSG00000069011 D 0.627
L893_g29073 Steinernema glaseri L893_g29073 I 0.626
Hba_14752 Heterorhabditis bacteriophora Hba_14752 I 0.626
SROB_0000568701 Schistosoma rodhaini SROB_0000568701 I 0.625
CRX Homo sapiens ENSG00000105392 D 0.625
SROB_0001170301 Schistosoma rodhaini SROB_0001170301 I 0.624
Sjc_0039470 Schistosoma japonicum Sjc_0039470 I 0.624
MhA1_Contig1070.frz3.gene23 Meloidogyne hapla MhA1_Contig1070.frz3.gene23 I 0.624
BARX2 Vicugna pacos ENSVPAG00000010480 I 0.623
GPLIN_000644800 Globodera pallida GPLIN_000644800 I 0.623
BARX2 Tupaia belangeri ENSTBEG00000000641 I 0.623
NBR_0000086401 Nippostrongylus brasiliensis NBR_0000086401 I 0.621
SVUK_0000982701 Strongylus vulgaris SVUK_0000982701 I 0.620
SMTD_0000630101 Schistosoma mattheei SMTD_0000630101 I 0.618
SNAPOd2T00020544001 Oikopleura dioica SNAPOd2T00020544001 I 0.617
BTMF_0000212801 Brugia timori BTMF_0000212801 I 0.617
ANCCEY_13939 Ancylostoma ceylanicum ANCCEY_13939 I 0.617
ENSAPLG00000000623 Anas platyrhynchos ENSAPLG00000000623 I 0.617
OESDEN_08182 Oesophagostomum dentatum OESDEN_08182 I 0.616
nAv.1.0.1.g02632 Acanthocheilonema viteae nAv.1.0.1.g02632 I 0.616
HPLM_0000640301 Haemonchus placei HPLM_0000640301 I 0.616
DME_0000391201 Dracunculus medinensis DME_0000391201 I 0.616
ML145813a Mnemiopsis leidyi ML145813a I 0.616
TELCIR_15720 Teladorsagia circumcincta TELCIR_15720 I 0.616
TMUE_s0047002700 Trichuris muris TMUE_s0047002700 I 0.614
genemark-nMf.1.1.scaf05885-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf05885-processed-gene-0.2 I 0.614
Rhox2g Mus musculus ENSMUSG00000079629 N 0.612
ISCW005275 Ixodes scapularis ISCW005275 I 0.612
CapteG187461 Capitella teleta CapteG187461 I 0.612
Rhox2c Mus musculus ENSMUSG00000079637 N 0.612
SNAPOd2T00009387001 Oikopleura dioica SNAPOd2T00009387001 I 0.611
HOXB3 Echinops telfairi ENSETEG00000007761 I 0.611
ENSECAG00000023678 Equus caballus ENSECAG00000023678 I 0.610
Alligator_sinensis_CCG010661.1 Alligator sinensis Alligator_sinensis_CCG010661.1 I 0.610
D915_06583 Fasciola hepatica D915_06583 N 0.610
ENSMICG00000004221 Microcebus murinus ENSMICG00000004221 I 0.606
AEPI008243 Anopheles epiroticus AEPI008243 I 0.605
TMUE_s0096002400 Trichuris muris TMUE_s0096002400 I 0.603
ENSPMAG00000010239 Petromyzon marinus ENSPMAG00000010239 I 0.602
lmx1a Danio rerio ENSDARG00000020354 I 0.602
ENSOANG00000031547 Ornithorhynchus anatinus ENSOANG00000031547 I 0.601
SPER_0003668801 Spirometra erinaceieuropaei SPER_0003668801 I 0.601
ENSMEUG00000003167 Macropus eugenii ENSMEUG00000003167 I 0.601
PXEA_0001880101 Protopolystoma xenopodis PXEA_0001880101 I 0.601
GH24924 Drosophila grimshawi FBgn0132379 I 0.600
SNAPOd2T00004995001 Oikopleura dioica SNAPOd2T00004995001 N 0.600
AMIN005749 Anopheles minimus AMIN005749 I 0.600
hoxd9.S Xenopus laevis XB-GENE-485796 I 0.600
MESCA002384 Megaselia scalaris MESCA002384 I 0.600
TRE_0001706901 Trichobilharzia regenti TRE_0001706901 I 0.599
SCUD_0002251201 Schistosoma curassoni SCUD_0002251201 I 0.599
LDEC001243 Leptinotarsa decemlineata LDEC001243 I 0.599
ENSGALG00000011059 Gallus gallus ENSGALG00000011059 I 0.266
ENSGALG00000028908 Gallus gallus ENSGALG00000028908 I 0.266
ENSGALG00000026434 Gallus gallus ENSGALG00000026434 I 0.266
ENSGACG00000005623 Gasterosteus aculeatus ENSGACG00000005623 I 0.266
HOXA6 Homo sapiens ENSG00000106006 D 0.266
HOXA6 Dasypus novemcinctus ENSDNOG00000001633 I 0.266
HOXA6 Canis familiaris ENSCAFG00000002953 I 0.266
HOXA6 Choloepus hoffmanni ENSCHOG00000009037 I 0.266
HOXA6 Bos taurus ENSBTAG00000024341 I 0.266
ENSAMXG00000015991 Astyanax mexicanus ENSAMXG00000015991 I 0.266
HOXB6 Anolis carolinensis ENSACAG00000006474 I 0.266
ENSAMEG00000005892 Ailuropoda melanoleuca ENSAMEG00000005892 I 0.266
HOXA6 Callithrix jacchus ENSCJAG00000008082 I 0.266
ENSCPOG00000020838 Cavia porcellus ENSCPOG00000020838 I 0.266
HOXA6 Equus caballus ENSECAG00000000575 I 0.266
ENSFALG00000009450 Ficedula albicollis ENSFALG00000009450 I 0.266
Hoxa6 Dipodomys ordii ENSDORG00000006319 I 0.266
HOXA6 Gorilla gorilla ENSGGOG00000002218 I 0.266
ENSCSAG00000014287 Chlorocebus sabaeus ENSCSAG00000014287 I 0.266
hoxb6a Danio rerio ENSDARG00000010630 I 0.266
HOXA6 Felis catus ENSFCAG00000027995 I 0.266
HOXA6 Myotis lucifugus ENSMLUG00000014517 I 0.266
HOXA6 Procavia capensis ENSPCAG00000015603 I 0.266
ENSPANG00000013799 Papio anubis ENSPANG00000013799 I 0.266
ENSPFOG00000001956 Poecilia formosa ENSPFOG00000001956 I 0.266
ENSPPYG00000017702 Pongo abelii ENSPPYG00000017702 I 0.266
ENSPSIG00000007278 Pelodiscus sinensis ENSPSIG00000007278 I 0.266
ENSORLG00000017036 Oryzias latipes ENSORLG00000017036 I 0.266
Aan_R001086 Calypte anna Aan_R001086 I 0.266
Alligator_sinensis_CCG014472.2 Alligator sinensis Alligator_sinensis_CCG014472.2 I 0.266
Alligator_sinensis_CCG014472.1 Alligator sinensis Alligator_sinensis_CCG014472.1 I 0.266
Alligator_sinensis_CCG010191.1 Alligator sinensis Alligator_sinensis_CCG010191.1 I 0.266
Afo_R003421 Aptenodytes forsteri Afo_R003421 I 0.266
HOXA6 Pan troglodytes ENSPTRG00000039535 I 0.266
HOXA6 Pteropus vampyrus ENSPVAG00000002491 I 0.266
ENSTBEG00000010861 Tupaia belangeri ENSTBEG00000010861 I 0.266
ENSTGUG00000002913 Taeniopygia guttata ENSTGUG00000002913 I 0.266
ENSSTOG00000022675 Ictidomys tridecemlineatus ENSSTOG00000022675 I 0.266
ENSSSCG00000016702 Sus scrofa ENSSSCG00000016702 I 0.266
ENSSHAG00000016714 Sarcophilus harrisii ENSSHAG00000016714 I 0.266
LOC100909604 Rattus norvegicus ENSRNOG00000048917 I 0.266
ENSTNIG00000001758 Tetraodon nigroviridis ENSTNIG00000001758 I 0.266
ENSXMAG00000002841 Xiphophorus maculatus ENSXMAG00000002841 I 0.266
HOXA6 Tursiops truncatus ENSTTRG00000006778 I 0.266
ENSTRUG00000009487 Takifugu rubripes ENSTRUG00000009487 I 0.266
ENSTRUG00000001069 Takifugu rubripes ENSTRUG00000001069 I 0.266
Brh_R009844 Buceros rhinoceros Brh_R009844 I 0.266
Cmyd_10015817 Chelonia mydas Cmyd_10015817 I 0.266
ENSMMUG00000013457 Macaca mulatta ENSMMUG00000013457 I 0.266
Hoxa6 Rattus norvegicus ENSRNOG00000060066 I 0.266
ENSMODG00000000472 Monodelphis domestica ENSMODG00000000472 I 0.266
ENSMPUG00000004779 Mustela putorius furo ENSMPUG00000004779 I 0.266
Hoxa6 Mus musculus ENSMUSG00000043219 D 0.266
ENSMICG00000000493 Microcebus murinus ENSMICG00000000493 I 0.266
ENSMEUG00000015407 Macropus eugenii ENSMEUG00000015407 I 0.266
ENSGMOG00000019983 Gadus morhua ENSGMOG00000019983 I 0.266
ENSLACG00000017339 Latimeria chalumnae ENSLACG00000017339 I 0.266
HOXA6 Loxodonta africana ENSLAFG00000006281 I 0.266
ENSLOCG00000013443 Lepisosteus oculatus ENSLOCG00000013443 I 0.266
ENSNLEG00000014990 Nomascus leucogenys ENSNLEG00000014990 I 0.266
HOXB6 Ornithorhynchus anatinus ENSOANG00000009168 I 0.266
Ogr12576 Ophisaurus gracilis Ogr12576 I 0.266
Gfo_R015841 Geospiza fortis Gfo_R015841 I 0.266
ENSP00000222728 Macaca fascicularis ENSP00000222728 I 0.266
ENSP00000222728-D1 Bos grunniens ENSP00000222728-D1 I 0.266
Pvit_18298 Pogona vitticeps Pvit_18298 I 0.266
HOXA6 Ochotona princeps ENSOPRG00000010431 I 0.266
ENSOARG00000009758 Ovis aries ENSOARG00000009758 I 0.266
HOXA6 Oryctolagus cuniculus ENSOCUG00000029344 I 0.266
HOXA6 Otolemur garnettii ENSOGAG00000012384 I 0.266
ENSONIG00000006185 Oreochromis niloticus ENSONIG00000006185 I 0.266
ENSGMOG00000009870 Gadus morhua ENSGMOG00000009870 I 0.266