Aquca_002_00545 (Aquilegia coerulea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Aquca_002_00545 T228017_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.865 0.982
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.865 0.982
estExt_gwp_gw1.C_70211
M02220_2.00
Physcomitrella patens
HMATNANDNN

NNHNTNATKD
PBM
Weirauch et al.(2014)
pTH8489
0.829 0.821
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.813 0.804
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.813 0.804
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.813 0.804
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.813 0.804
ATHB-6
M02040_2.00
Arabidopsis thaliana
HATNATTDN

NHAATNATD
PBM
Weirauch et al.(2014)
pTH7670
0.800 0.786
ATHB-16
M02050_2.00
Arabidopsis thaliana
YAATMATT

AATKATTR
PBM
Weirauch et al.(2014)
pTH7270
0.800 0.786
ATHB-6
M06909_2.00
Arabidopsis thaliana
NNNHATKATTR

YAATMATDNNN
Dap-seq
OMalley et al.(2016)
ATHB6_col_a
0.800 0.786
ATHB-6
M06910_2.00
Arabidopsis thaliana
NCAATAATTRN

NYAATTATTGN
Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a
0.800 0.786
HAT5
M06914_2.00
Arabidopsis thaliana
NHAATAATTDW

WHAATTATTDN
Dap-seq
OMalley et al.(2016)
HAT5_col_a
0.796 0.786
HAT5
M06915_2.00
Arabidopsis thaliana
WNYAATAATTRWDN

NHWYAATTATTRNW
Dap-seq
OMalley et al.(2016)
HAT5_colamp_a
0.796 0.786
HAT5
M02683_2.00
Arabidopsis thaliana
SCAATAATTNNV

BNNAATTATTGS
SELEX
Mathelier et al.(2014)
MA0008.2
0.796 0.786
HAT5
M10624_2.00
Arabidopsis thaliana
YSCAATAATTNNVN

NBNNAATTATTGSR
Transfac
Matys et al.(2006)
P$ATHB1_01
0.796 0.786
ATHB-21
M06907_2.00
Arabidopsis thaliana
NNWHCAATWATTDN

NHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB21_col_a
0.738 0.643
ATHB-21
M06908_2.00
Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN

NNAHCAATWATTDNNNHHWW
Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a
0.738 0.643
HB-5
M06924_2.00
Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH

DWWDNNNHMAATWATTGDTNN
Dap-seq
OMalley et al.(2016)
ATHB40_col_a
0.736 0.607
HB-5
M06925_2.00
Arabidopsis thaliana
HHAATWATTGDWNN

NNWHCAATWATTDD
Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a
0.736 0.607
ATHB-53
M06934_2.00
Arabidopsis thaliana
HMAATAATTRD

HYAATTATTKD
Dap-seq
OMalley et al.(2016)
ATHB53_col_a
0.731 0.571
ATHB-53
M06935_2.00
Arabidopsis thaliana
NNWHCAATWATTDDN

NHHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a
0.731 0.571
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.719 0.875
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.719 0.875
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD

HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.703 0.839
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD

HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.703 0.839
ATHB-7
M02043_2.00
Arabidopsis thaliana
NHWTGATTGN

NCAATCAWDN
PBM
Weirauch et al.(2014)
pTH8090
0.600 0.607
ATHB-7
M06911_2.00
Arabidopsis thaliana
NHYCAATCATTSW

WSAATGATTGRDN
Dap-seq
OMalley et al.(2016)
ATHB7_col_a
0.600 0.607
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_002_00545.1 Homeodomain 81 136
Aquca_002_00545.2 Homeodomain 75 130

Links

Other Homeodomain family TFs
Other Aquilegia coerulea TFs

820 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TVAG_605600 Trichomonas vaginalis TVAG_605600 N 0.000
TVAG_424000 Trichomonas vaginalis TVAG_424000 N 0.000
TVAG_413290 Trichomonas vaginalis TVAG_413290 N 0.000
TVAG_412430 Trichomonas vaginalis TVAG_412430 N 0.000
TVAG_406830 Trichomonas vaginalis TVAG_406830 N 0.000
TVAG_394920 Trichomonas vaginalis TVAG_394920 N 0.000
TVAG_386020 Trichomonas vaginalis TVAG_386020 N 0.000
TVAG_385170 Trichomonas vaginalis TVAG_385170 N 0.000
TVAG_385080 Trichomonas vaginalis TVAG_385080 N 0.000
TVAG_355830 Trichomonas vaginalis TVAG_355830 N 0.000
TVAG_433570 Trichomonas vaginalis TVAG_433570 N 0.000
TVAG_441110 Trichomonas vaginalis TVAG_441110 N 0.000
TVAG_602890 Trichomonas vaginalis TVAG_602890 N 0.000
TVAG_600930 Trichomonas vaginalis TVAG_600930 N 0.000
TVAG_596820 Trichomonas vaginalis TVAG_596820 N 0.000
TVAG_572360 Trichomonas vaginalis TVAG_572360 N 0.000
TVAG_571720 Trichomonas vaginalis TVAG_571720 N 0.000
TVAG_532700 Trichomonas vaginalis TVAG_532700 N 0.000
TVAG_507470 Trichomonas vaginalis TVAG_507470 N 0.000
TVAG_465890 Trichomonas vaginalis TVAG_465890 N 0.000
TVAG_444800 Trichomonas vaginalis TVAG_444800 N 0.000
TVAG_347380 Trichomonas vaginalis TVAG_347380 N 0.000
TVAG_345810 Trichomonas vaginalis TVAG_345810 N 0.000
TVAG_148260 Trichomonas vaginalis TVAG_148260 N 0.000
TVAG_140370 Trichomonas vaginalis TVAG_140370 N 0.000
TVAG_125150 Trichomonas vaginalis TVAG_125150 N 0.000
TVAG_115930 Trichomonas vaginalis TVAG_115930 N 0.000
TVAG_110930 Trichomonas vaginalis TVAG_110930 N 0.000
TVAG_102030 Trichomonas vaginalis TVAG_102030 N 0.000
TVAG_072790 Trichomonas vaginalis TVAG_072790 N 0.000
TVAG_072000 Trichomonas vaginalis TVAG_072000 N 0.000
TVAG_028280 Trichomonas vaginalis TVAG_028280 N 0.000
TVAG_178180 Trichomonas vaginalis TVAG_178180 N 0.000
TVAG_182650 Trichomonas vaginalis TVAG_182650 N 0.000
TVAG_343330 Trichomonas vaginalis TVAG_343330 N 0.000
TVAG_341980 Trichomonas vaginalis TVAG_341980 N 0.000
TVAG_331920 Trichomonas vaginalis TVAG_331920 N 0.000
TVAG_318130 Trichomonas vaginalis TVAG_318130 N 0.000
TVAG_293920 Trichomonas vaginalis TVAG_293920 N 0.000
TVAG_278200 Trichomonas vaginalis TVAG_278200 N 0.000
TVAG_238990 Trichomonas vaginalis TVAG_238990 N 0.000
TVAG_224300 Trichomonas vaginalis TVAG_224300 N 0.000
TVAG_223780 Trichomonas vaginalis TVAG_223780 N 0.000
TVAG_023410 Trichomonas vaginalis TVAG_023410 N 0.000