Bostr.26833s0169 (Boechera stricta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Bostr.26833s0169 T228129_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.815 0.930
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.815 0.930
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.815 0.930
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT

AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.810 0.877
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.810 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26833s0169.1.p Homeodomain 23 83

Links

Other Homeodomain family TFs
Other Boechera stricta TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_Genewise1Plus.C_sca_8_chr1_1_00241 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00241 N 0.000
FPSE_09753 Fusarium pseudograminearum FPSE_09753 N 0.000
MAC_05786 Metarhizium acridum MAC_05786 N 0.000
MAPG_00097 Magnaporthe poae MAPG_00097 I 0.000
NechaG65087 Fusarium solani NechaG65087 N 0.000