Bostr.7903s0027 (Boechera stricta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Bostr.7903s0027 T228166_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.717 0.667
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.717 0.667
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA

TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.604 0.421
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN

NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.604 0.421
GRMZM2G038252
M02137_2.00
Zea mays
HTRATTGV

BCAATYAD
PBM
Weirauch et al.(2014)
pTH6141
0.604 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7903s0027.1.p Homeodomain 57 118

Links

Other Homeodomain family TFs
Other Boechera stricta TFs

Invalid Input OrderBy

539 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action