Cagra.2552s0003 (Capsella grandiflora)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cagra.2552s0003 T228235_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK25011.1
M01253_2.00
Cannabis sativa
NNWYRMDBNN

NNVHKYRWNN
PBM
Lambert et al.(2019)
pTH11258
0.679 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2552s0003.1.p Homeodomain 20 76
Cagra.2552s0003.2.p Homeodomain 20 76

Links

Other Homeodomain family TFs
Other Capsella grandiflora TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000000496 Ailuropoda melanoleuca ENSAMEG00000000496 N 0.000
THAP2 Bos taurus ENSBTAG00000012271 N 0.000
ENSBTAP00000016276-D2 Bos grunniens ENSBTAP00000016276-D2 N 0.000
THAP2 Canis familiaris ENSCAFG00000000456 N 0.000
THAP2 Callithrix jacchus ENSCJAG00000001382 N 0.000
THAP2 Cavia porcellus ENSCPOG00000009524 N 0.000
ENSCSAG00000004092 Chlorocebus sabaeus ENSCSAG00000004092 N 0.000
ENSDNOG00000049696 Dasypus novemcinctus ENSDNOG00000049696 N 0.000
Thap2 Dipodomys ordii ENSDORG00000006270 N 0.000
THAP2 Homo sapiens ENSG00000173451 N 0.000
THAP2 Gorilla gorilla ENSGGOG00000015483 N 0.000
ENSMEUG00000015495 Macropus eugenii ENSMEUG00000015495 N 0.000
THAP2 Myotis lucifugus ENSMLUG00000004164 N 0.000
ENSMMUG00000020946 Macaca mulatta ENSMMUG00000020946 N 0.000
ENSMMUP00000027563 Macaca fascicularis ENSMMUP00000027563 N 0.000
ENSMPUG00000017487 Mustela putorius furo ENSMPUG00000017487 N 0.000
ENSMPUG00000019081 Mustela putorius furo ENSMPUG00000019081 N 0.000
Thap2 Mus musculus ENSMUSG00000020137 N 0.000
ENSNLEG00000004398 Nomascus leucogenys ENSNLEG00000004398 N 0.000
ENSOARG00000014616 Ovis aries ENSOARG00000014616 N 0.000
THAP2 Oryctolagus cuniculus ENSOCUG00000013308 N 0.000
THAP2 Otolemur garnettii ENSOGAG00000027278 N 0.000
THAP2 Ochotona princeps ENSOPRG00000013944 N 0.000
THAP2 Procavia capensis ENSPCAG00000003970 N 0.000
ENSPPYG00000004774 Pongo abelii ENSPPYG00000004774 N 0.000
ENSPSIG00000012990 Pelodiscus sinensis ENSPSIG00000012990 N 0.000
THAP2 Pan troglodytes ENSPTRG00000005225 N 0.000
THAP2 Pteropus vampyrus ENSPVAG00000012359 N 0.000
Thap2 Rattus norvegicus ENSRNOG00000003993 N 0.000
THAP2 Sus scrofa ENSSSCG00000021270 N 0.000
ENSSTOG00000002694 Ictidomys tridecemlineatus ENSSTOG00000002694 N 0.000
THAP2 Tupaia belangeri ENSTBEG00000016924 N 0.000
ENSTSYG00000005486 Tarsius syrichta ENSTSYG00000005486 N 0.000
THAP2 Vicugna pacos ENSVPAG00000010909 N 0.000