CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10013054m.g
(
Capsella rubella
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Carubv10013054m.g
T228311_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10013054m
Homeodomain
625
674
KQTDPKAQRLYISFQENQYPDKATKESLAKELRMTITQVSNWFKYKRYST
Carubv10013144m
Homeodomain
625
666
KQTDPKAQRLYISFQENQYPDKATKESLAKELRMTITQVRNF
Carubv10013245m
Homeodomain
572
613
KQTDPKAQRLYISFQENQYPDKATKESLAKELRMTITQVRNF
Links
Other
Homeodomain
family TFs
Other
Capsella rubella
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy