Carubv10014092m.g (Capsella rubella)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Carubv10014092m.g T228314_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10014092m Homeodomain 18 76
Carubv10014097m Homeodomain 18 76

Links

Other Homeodomain family TFs
Other Capsella rubella TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.867
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.867
fgenesh2_kg.3__2039__AT3G18380.2 Arabidopsis lyrata fgenesh2_kg.3__2039__AT3G18380.2 N 0.854
AT3G18380 Arabidopsis thaliana AT3G18380 N 0.854
Bo5g118650 Brassica oleracea Bo5g118650 N 0.848
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.806
Pm011344 Prunus mume Pm011344 N 0.805
Bra022316 Brassica rapa Bra022316 N 0.795
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.795
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.780
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.769
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.757
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.752
POPTR_0174s00240 Populus trichocarpa POPTR_0174s00240 N 0.752
evm.TU.supercontig_80.16 Carica papaya evm.TU.supercontig_80.16 N 0.744
GRMZM2G111204 Zea mays GRMZM2G111204 N 0.722
Bo1g117640 Brassica oleracea Bo1g117640 N 0.710
Bra037587 Brassica rapa Bra037587 N 0.710
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.663
PK03811.1 Cannabis sativa PK03811.1 N 0.661
mgf014854m Mimulus guttatus mgf014854m N 0.659
TRIUR3_26093 Triticum urartu TRIUR3_26093 N 0.654
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.654
30209.m001510 Ricinus communis 30209.m001510 N 0.625
Ogr09559 Ophisaurus gracilis Ogr09559 N 0.605
CBG05223 Caenorhabditis briggsae CBG05223 N 0.601
TCM_046875 Theobroma cacao TCM_046875 N 0.599