CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10016895m.g
(
Citrus clementina
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ciclev10016895m.g
T228398_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q39944_HELAN
M10802_2.00
Helianthus annuus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HAHB4_01
0.625
0.439
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN
NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.602
0.509
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN
NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.602
0.509
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10016895m
Homeodomain
14
70
KLSRKRLTQDQVRLLETCFNANQKLQVDRKLELACRLGLPPRQIAVWYQNRRAREKI
Links
Other
Homeodomain
family TFs
Other
Citrus clementina
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy