Eucgr.D02645 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.D02645 T228466_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-7
M02043_2.00
Arabidopsis thaliana
NHWTGATTGN

NCAATCAWDN
PBM
Weirauch et al.(2014)
pTH8090
0.712 0.875
ATHB-7
M06911_2.00
Arabidopsis thaliana
NHYCAATCATTSW

WSAATGATTGRDN
Dap-seq
OMalley et al.(2016)
ATHB7_col_a
0.712 0.875
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.631 0.607
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.631 0.607
estExt_gwp_gw1.C_70211
M02220_2.00
Physcomitrella patens
HMATNANDNN

NNHNTNATKD
PBM
Weirauch et al.(2014)
pTH8489
0.627 0.679
HOX6
M02157_2.00
Oryza sativa
DTGATTRVNN

NNBYAATCAH
PBM
Weirauch et al.(2014)
pTH6378
0.621 0.768
Q39944_HELAN
M10802_2.00
Helianthus annuus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HAHB4_01
0.612 0.661
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.611 0.607
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.611 0.607
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.611 0.607
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.611 0.607
ATHB-21
M06907_2.00
Arabidopsis thaliana
NNWHCAATWATTDN

NHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB21_col_a
0.608 0.589
ATHB-21
M06908_2.00
Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN

NNAHCAATWATTDNNNHHWW
Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a
0.608 0.589
HB-5
M06924_2.00
Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH

DWWDNNNHMAATWATTGDTNN
Dap-seq
OMalley et al.(2016)
ATHB40_col_a
0.606 0.554
HB-5
M06925_2.00
Arabidopsis thaliana
HHAATWATTGDWNN

NNWHCAATWATTDD
Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a
0.606 0.554
ATHB-53
M06934_2.00
Arabidopsis thaliana
HMAATAATTRD

HYAATTATTKD
Dap-seq
OMalley et al.(2016)
ATHB53_col_a
0.601 0.536
ATHB-53
M06935_2.00
Arabidopsis thaliana
NNWHCAATWATTDDN

NHHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a
0.601 0.536
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02645.1 Homeodomain 29 84

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

508 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL004806 Aedes aegypti AAEL004806 I 0.000
AALB010205 Anopheles albimanus AALB010205 I 0.000
AARA000098 Anopheles arabiensis AARA000098 I 0.000
AATE020384 Anopheles atroparvus AATE020384 I 0.000
ACAC_0001026501 Angiostrongylus cantonensis ACAC_0001026501 I 0.000
ACAC_0001381401 Angiostrongylus cantonensis ACAC_0001381401 I 0.000
ACHR001612 Anopheles christyi ACHR001612 I 0.000
ACOC_0001094901 Angiostrongylus costaricensis ACOC_0001094901 I 0.000
ACOC_0001313301 Angiostrongylus costaricensis ACOC_0001313301 I 0.000
ACOM041708 Anopheles coluzzii ACOM041708 I 0.000
ACUA022835 Anopheles culicifacies ACUA022835 I 0.000
ACYPI000624 Acyrthosiphon pisum ACYPI000624 I 0.000
ACYPI34996 Acyrthosiphon pisum ACYPI34996 I 0.000
ADAC003701 Anopheles darlingi ADAC003701 I 0.000
ADIR011723 Anopheles dirus ADIR011723 I 0.000
AFAF003290 Anopheles farauti AFAF003290 I 0.000
AFUN011554 Anopheles funestus AFUN011554 I 0.000
AGAP010520 Anopheles gambiae AGAP010520 I 0.000
ALUE_0001029501 Ascaris lumbricoides ALUE_0001029501 I 0.000
AMEM014876 Anopheles merus AMEM014876 I 0.000
AMIN001268 Anopheles minimus AMIN001268 I 0.000
ANCCAN_01941 Ancylostoma caninum ANCCAN_01941 I 0.000
ANCCAN_11801 Ancylostoma caninum ANCCAN_11801 I 0.000
ANCCEY_05272 Ancylostoma ceylanicum ANCCEY_05272 I 0.000
ANCCEY_14830 Ancylostoma ceylanicum ANCCEY_14830 I 0.000
ANCDUO_04077 Ancylostoma duodenale ANCDUO_04077 I 0.000
ANCDUO_09307 Ancylostoma duodenale ANCDUO_09307 I 0.000
AQUA001297 Anopheles quadriannulatus AQUA001297 I 0.000
ASIM_0000327401 Anisakis simplex ASIM_0000327401 I 0.000
ASIM_0001887501 Anisakis simplex ASIM_0001887501 I 0.000
ASTEI07110 Anopheles stephensi ASTEI07110 I 0.000
ASU_08391 Ascaris suum ASU_08391 I 0.000
ASU_13892 Ascaris suum ASU_13892 I 0.000
BGIBMGA002047 Bombyx mori BGIBMGA002047 I 0.000
BGLB001194 Biomphalaria glabrata BGLB001194 I 0.000
BGLB007176 Biomphalaria glabrata BGLB007176 I 0.000
BXY_0235800 Bursaphelenchus xylophilus BXY_0235800 I 0.000
CapteG137485 Capitella teleta CapteG137485 I 0.000
CapteG88086 Capitella teleta CapteG88086 I 0.000
CBG04311 Caenorhabditis briggsae CBG04311 I 0.000
CBG22482 Caenorhabditis briggsae CBG22482 I 0.000
CBN11985 Caenorhabditis brenneri CBN11985 I 0.000
CBN12606 Caenorhabditis brenneri CBN12606 I 0.000
CBN19589 Caenorhabditis brenneri CBN19589 I 0.000
CGI_10010790 Crassostrea gigas CGI_10010790 I 0.000
CGI_10021556 Crassostrea gigas CGI_10021556 I 0.000
CGI_10024574 Crassostrea gigas CGI_10024574 I 0.000
CJA11853 Caenorhabditis japonica CJA11853 I 0.000
CJA34076 Caenorhabditis japonica CJA34076 I 0.000
CLEC010043 Cimex lectularius CLEC010043 I 0.000
CPIJ004724 Culex quinquefasciatus CPIJ004724 I 0.000
CpipJ_CPIJ004724 Culex pipiens CpipJ_CPIJ004724 I 0.000
CRE14941 Caenorhabditis remanei CRE14941 I 0.000
CRE26517 Caenorhabditis remanei CRE26517 I 0.000
D918_01816 Trichuris suis D918_01816 I 0.000
D918_06264 Trichuris suis D918_06264 I 0.000
DAPPUDRAFT_27999 Daphnia pulex DAPPUDRAFT_27999 I 0.000
DAPPUDRAFT_48391 Daphnia pulex DAPPUDRAFT_48391 I 0.000
DICVIV_04886 Dictyocaulus viviparus DICVIV_04886 I 0.000
DICVIV_12136 Dictyocaulus viviparus DICVIV_12136 I 0.000
DILT_0000895101 Diphyllobothrium latum DILT_0000895101 I 0.000
ECANG7_07352 Echinococcus canadensis ECANG7_07352 I 0.000
EmuJ_000608700 Echinococcus multilocularis EmuJ_000608700 I 0.000
ENSACAG00000008367 Anolis carolinensis ENSACAG00000008367 I 0.000
ENSAMEG00000012407 Ailuropoda melanoleuca ENSAMEG00000012407 I 0.000
KLF1 Bos taurus ENSBTAG00000006083 I 0.000
ENSBTAP00000043340-D1 Bos grunniens ENSBTAP00000043340-D1 I 0.000
KLF1 Canis familiaris ENSCAFG00000017111 I 0.000
klf2 Ciona intestinalis ENSCING00000014590 I 0.000
zf(c2h2)-23 Ciona intestinalis ENSCING00000014976 I 0.000
KLF1 Callithrix jacchus ENSCJAG00000004762 I 0.000
KLF8 Callithrix jacchus ENSCJAG00000007304 I 0.000
KLF1 Cavia porcellus ENSCPOG00000000784 I 0.000
KLF8 Cavia porcellus ENSCPOG00000010165 I 0.000
ENSCSAG00000006545 Chlorocebus sabaeus ENSCSAG00000006545 I 0.000
ENSCSAG00000012078 Chlorocebus sabaeus ENSCSAG00000012078 I 0.000
ENSCSAVG00000002903 Ciona savignyi ENSCSAVG00000002903 I 0.000
ENSCSAVG00000009966 Ciona savignyi ENSCSAVG00000009966 I 0.000
KLF8 Equus caballus ENSECAG00000016062 I 0.000
KLF1 Felis catus ENSFCAG00000026066 I 0.000
KLF8 Homo sapiens ENSG00000102349 D 0.000
KLF1 Homo sapiens ENSG00000105610 D 0.000
KLF1 Gorilla gorilla ENSGGOG00000003408 I 0.000
KLF8 Gorilla gorilla ENSGGOG00000008188 I 0.000
ENSLACG00000004425 Latimeria chalumnae ENSLACG00000004425 I 0.000
KLF1 Loxodonta africana ENSLAFG00000016145 I 0.000
KLF1 Microcebus murinus ENSMICG00000016260 I 0.000
KLF1 Myotis lucifugus ENSMLUG00000012751 I 0.000
KLF8 Myotis lucifugus ENSMLUG00000016695 I 0.000
KLF1 Macaca mulatta ENSMMUG00000011230 I 0.000
ENSMMUP00000014716 Macaca fascicularis ENSMMUP00000014716 I 0.000
ENSMMUP00000019255 Macaca fascicularis ENSMMUP00000019255 I 0.000
ENSMODG00000010888 Monodelphis domestica ENSMODG00000010888 I 0.000
ENSMPUG00000004544 Mustela putorius furo ENSMPUG00000004544 I 0.000
Klf8 Mus musculus ENSMUSG00000041649 D 0.000
ENSNLEG00000012868 Nomascus leucogenys ENSNLEG00000012868 I 0.000
ENSNLEG00000016353 Nomascus leucogenys ENSNLEG00000016353 I 0.000
ENSOARG00000005543 Ovis aries ENSOARG00000005543 I 0.000
KLF8 Oryctolagus cuniculus ENSOCUG00000005068 I 0.000
KLF1 Oryctolagus cuniculus ENSOCUG00000011998 I 0.000
KLF1 Otolemur garnettii ENSOGAG00000025438 I 0.000
ENSONIG00000013257 Oreochromis niloticus ENSONIG00000013257 I 0.000
KLF1 Ochotona princeps ENSOPRG00000004951 I 0.000
klf8 Oryzias latipes ENSORLG00000015374 I 0.000
ENSP00000417303-D1 Bos grunniens ENSP00000417303-D1 I 0.000
KLF1 Procavia capensis ENSPCAG00000015589 I 0.000
ENSPFOG00000000812 Poecilia formosa ENSPFOG00000000812 I 0.000
ENSPMAG00000002754 Petromyzon marinus ENSPMAG00000002754 I 0.000
ENSPPYG00000009612 Pongo abelii ENSPPYG00000009612 I 0.000
ENSPPYG00000020400 Pongo abelii ENSPPYG00000020400 I 0.000
KLF1 Pan troglodytes ENSPTRG00000010547 I 0.000
KLF8 Pan troglodytes ENSPTRG00000021957 I 0.000
KLF8 Pteropus vampyrus ENSPVAG00000000264 I 0.000
Klf8 Rattus norvegicus ENSRNOG00000039057 I 0.000
KLF1 Sus scrofa ENSSSCG00000013730 I 0.000
ENSSTOG00000012012 Ictidomys tridecemlineatus ENSSTOG00000012012 I 0.000
KLF1 Tupaia belangeri ENSTBEG00000013433 I 0.000
klf8 Tetraodon nigroviridis ENSTNIG00000004690 I 0.000
ENSTRUG00000007828 Takifugu rubripes ENSTRUG00000007828 I 0.000
klf8 Takifugu rubripes ENSTRUG00000009714 I 0.000
ENSTSYG00000011477 Tarsius syrichta ENSTSYG00000011477 I 0.000
KLF1 Tursiops truncatus ENSTTRG00000003596 I 0.000
KLF8 Tursiops truncatus ENSTTRG00000008773 I 0.000
EVEC_0000950401 Enterobius vermicularis EVEC_0000950401 I 0.000
EVEC_0001049001 Enterobius vermicularis EVEC_0001049001 I 0.000
GA22108 Drosophila pseudoobscura FBgn0064422 I 0.000
GF11307 Drosophila ananassae FBgn0088347 I 0.000
GG20076 Drosophila erecta FBgn0112270 I 0.000
GH20915 Drosophila grimshawi FBgn0128377 I 0.000
GI18350 Drosophila mojavensis FBgn0141089 I 0.000
GL10855 Drosophila persimilis FBgn0148465 I 0.000
GM15591 Drosophila sechellia FBgn0170509 I 0.000
GD25089 Drosophila simulans FBgn0196401 I 0.000
GJ20749 Drosophila virilis FBgn0207886 I 0.000
GK19604 Drosophila willistoni FBgn0221602 I 0.000
GE11614 Drosophila yakuba FBgn0229413 I 0.000
CG42741 Drosophila melanogaster FBgn0261705 D 0.000
GB52090 Apis mellifera GB52090 I 0.000
HCOI00075700 Haemonchus contortus HCOI00075700 I 0.000
HCOI00079800 Haemonchus contortus HCOI00079800 I 0.000
HCOI00361200 Haemonchus contortus HCOI00361200 I 0.000
HCOI00991800 Haemonchus contortus HCOI00991800 I 0.000
HelroG126271 Helobdella robusta HelroG126271 I 0.000
HelroG128168 Helobdella robusta HelroG128168 I 0.000
HHAL010738-PA Halyomorpha halys HHAL010738-PA I 0.000
HMEL003963 Heliconius melpomene HMEL003963 I 0.000
HPBE_0001838801 Heligmosomoides bakeri HPBE_0001838801 I 0.000
HPLM_0000358501 Haemonchus placei HPLM_0000358501 I 0.000
HPLM_0000852701 Haemonchus placei HPLM_0000852701 I 0.000
HPLM_0001005201 Haemonchus placei HPLM_0001005201 I 0.000
ISCW016130 Ixodes scapularis ISCW016130 I 0.000
KGM_08807 Danaus plexippus KGM_08807 I 0.000
L798_10335 Zootermopsis nevadensis L798_10335 I 0.000
L889_g30961 Steinernema feltiae L889_g30961 I 0.000
L892_g18702 Steinernema scapterisci L892_g18702 I 0.000
L893_g29274 Steinernema glaseri L893_g29274 I 0.000
L898_g19820 Steinernema monticolum L898_g19820 I 0.000
LCUP006184 Lucilia cuprina LCUP006184 I 0.000
LDEC001973 Leptinotarsa decemlineata LDEC001973 I 0.000
LLOJ006638 Lutzomyia longipalpis LLOJ006638 I 0.000
LotgiG111402 Lottia gigantea LotgiG111402 I 0.000
LotgiG122963 Lottia gigantea LotgiG122963 I 0.000
LotgiG79321 Lottia gigantea LotgiG79321 I 0.000
MCOS_0000326501 Mesocestoides corti MCOS_0000326501 I 0.000
MDOA005423 Musca domestica MDOA005423 I 0.000
ML25776a Mnemiopsis leidyi ML25776a I 0.000
Myotis_brandtii_KLF8_10010984 Myotis brandtii Myotis_brandtii_KLF8_10010984 I 0.000
NBR_0001426101 Nippostrongylus brasiliensis NBR_0001426101 I 0.000
nDi.2.2.2.g06335 Dirofilaria immitis nDi.2.2.2.g06335 I 0.000
NECAME_03970 Necator americanus NECAME_03970 I 0.000
NECAME_14309 Necator americanus NECAME_14309 I 0.000
NEMVEDRAFT_v1g147359 Nematostella vectensis NEMVEDRAFT_v1g147359 I 0.000
NEMVEDRAFT_v1g229565 Nematostella vectensis NEMVEDRAFT_v1g229565 I 0.000
NEMVEDRAFT_v1g83807 Nematostella vectensis NEMVEDRAFT_v1g83807 I 0.000
nRc.2.0.1.g22861 Romanomermis culicivorax nRc.2.0.1.g22861 I 0.000
NV17335 Nasonia vitripennis NV17335 I 0.000
Ocbimv22019777m.g Octopus bimaculoides Ocbimv22019777m.g I 0.000
Ocbimv22021426m.g Octopus bimaculoides Ocbimv22021426m.g I 0.000
OESDEN_16972 Oesophagostomum dentatum OESDEN_16972 I 0.000
OESDEN_17037 Oesophagostomum dentatum OESDEN_17037 I 0.000
PHUM206780 Pediculus humanus PHUM206780 I 0.000
PHUM207190 Pediculus humanus PHUM207190 I 0.000
PHUM236000 Pediculus humanus PHUM236000 I 0.000
Ppa-klf-1 Pristionchus pacificus PPA04120 I 0.000
Pvit_14591 Pogona vitticeps Pvit_14591 I 0.000
Sakowv30017457m.g Saccoglossus kowalevskii Sakowv30017457m.g I 0.000
SBAD_0000267001 Soboliphyme baturini SBAD_0000267001 I 0.000
scaffold1313-EXSNAP2012.6 Pristionchus exspectatus scaffold1313-EXSNAP2012.6 I 0.000
SMAR000131 Strigamia maritima SMAR000131 I 0.000
SMAR007231 Strigamia maritima SMAR007231 I 0.000
SMU15021707 Schmidtea mediterranea SMU15021707 I 0.000
SMUV_0000108101 Syphacia muris SMUV_0000108101 I 0.000
SNAPOd2T00000985001 Oikopleura dioica SNAPOd2T00000985001 I 0.000
SNAPOd2T00013472001 Oikopleura dioica SNAPOd2T00013472001 I 0.000
SPU_017470 Strongylocentrotus purpuratus SPU_017470 I 0.000
SPU_020311 Strongylocentrotus purpuratus SPU_020311 I 0.000
SVUK_0000441401 Strongylus vulgaris SVUK_0000441401 I 0.000
TASK_0000897201 Taenia asiatica TASK_0000897201 I 0.000
TC006126 Tribolium castaneum TC006126 I 0.000
TCLT_0000033501 Thelazia callipaeda TCLT_0000033501 I 0.000
TCLT_0000664101 Thelazia callipaeda TCLT_0000664101 I 0.000
TELCIR_10559 Teladorsagia circumcincta TELCIR_10559 I 0.000
tetur01g01330 Tetranychus urticae tetur01g01330 I 0.000
tetur04g03720 Tetranychus urticae tetur04g03720 I 0.000
tetur17g00210 Tetranychus urticae tetur17g00210 I 0.000
TTAC_0000614201 Hydatigera taeniaeformis TTAC_0000614201 I 0.000
TTRE_0000268201 Trichuris trichiura TTRE_0000268201 I 0.000
klf-3 Caenorhabditis elegans WBGene00003480 D 0.000
klf-1 Caenorhabditis elegans WBGene00018990 I 0.000
YQE_08410 Dendroctonus ponderosae YQE_08410 I 0.000