Eucgr.I00022 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.I00022 T228492_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZHD7
M02155_2.00
Oryza sativa
NNWAANNNNN

NNNNNTTWNN
PBM
Weirauch et al.(2014)
pTH6076
0.673 0.600
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I00022.1 Homeodomain 153 211

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.816
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.816
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.778
29983.m003297 Ricinus communis 29983.m003297 I 0.733
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.698
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.698
Si020227m.g Setaria italica Si020227m.g I 0.696
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.694
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.694
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.694
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.674
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.673
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.673
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.673
ZHD7 Oryza sativa OS02G0706600 D 0.673
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.673
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.673
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.672
mgf026503m Mimulus guttatus mgf026503m I 0.671
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.663
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.663
Ca_12172 Cicer arietinum Ca_12172 I 0.663
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.654
MDP0000804580 Malus domestica MDP0000804580 I 0.645
TCM_001660 Theobroma cacao TCM_001660 I 0.640
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.640
mgf024641m Mimulus guttatus mgf024641m I 0.640
Pavir.J22932 Panicum virgatum Pavir.J22932 N 0.638
Traes_4AL_5659286D11 Triticum aestivum Traes_4AL_5659286D11 N 0.637
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.634
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.629
Ca_02034 Cicer arietinum Ca_02034 I 0.623
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.616