evm.TU.supercontig_109.22 (Carica papaya)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 evm.TU.supercontig_109.22 T228525_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.866 0.929
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.866 0.929
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.866 0.929
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT

AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.862 0.982
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.862 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_109.22 Homeodomain 16 75

Links

Other Homeodomain family TFs
Other Carica papaya TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009617 Calypte anna Aan_R009617 I 0.000
Afo_R005569 Aptenodytes forsteri Afo_R005569 I 0.000
Alligator_sinensis_CCG019450.1 Alligator sinensis Alligator_sinensis_CCG019450.1 I 0.000
Brh_R007241 Buceros rhinoceros Brh_R007241 I 0.000
Cmyd_10004276 Chelonia mydas Cmyd_10004276 I 0.000
ENSAMEG00000007373 Ailuropoda melanoleuca ENSAMEG00000007373 I 0.000
ENSAMXG00000017965 Astyanax mexicanus ENSAMXG00000017965 I 0.000
ENSAPLG00000014710 Anas platyrhynchos ENSAPLG00000014710 I 0.000
ENSCHOG00000010951 Choloepus hoffmanni ENSCHOG00000010951 I 0.000
ENSCSAG00000005351 Chlorocebus sabaeus ENSCSAG00000005351 I 0.000
ENSCSAG00000016240 Chlorocebus sabaeus ENSCSAG00000016240 I 0.000
ENSFALG00000011294 Ficedula albicollis ENSFALG00000011294 I 0.000
ENSFCAG00000025714 Felis catus ENSFCAG00000025714 I 0.000
ENSFCAG00000027283 Felis catus ENSFCAG00000027283 I 0.000
ENSGALG00000014870 Gallus gallus ENSGALG00000014870 I 0.000
ENSGGOG00000024705 Gorilla gorilla ENSGGOG00000024705 I 0.000
ENSGMOG00000014148 Gadus morhua ENSGMOG00000014148 I 0.000
ENSLACG00000002436 Latimeria chalumnae ENSLACG00000002436 I 0.000
ENSLOCG00000017255 Lepisosteus oculatus ENSLOCG00000017255 I 0.000
ENSMICG00000006415 Microcebus murinus ENSMICG00000006415 I 0.000
ENSMPUG00000014453 Mustela putorius furo ENSMPUG00000014453 I 0.000
ENSNLEG00000013721 Nomascus leucogenys ENSNLEG00000013721 I 0.000
ENSOARG00000008274 Ovis aries ENSOARG00000008274 I 0.000
ENSONIG00000001677 Oreochromis niloticus ENSONIG00000001677 I 0.000
ENSP00000357440-D1 Bos grunniens ENSP00000357440-D1 I 0.000
ENSPANG00000022516 Papio anubis ENSPANG00000022516 I 0.000
ENSPPYG00000016976 Pongo abelii ENSPPYG00000016976 I 0.000
ENSPSIG00000014566 Pelodiscus sinensis ENSPSIG00000014566 I 0.000
ENSSHAG00000013467 Sarcophilus harrisii ENSSHAG00000013467 I 0.000
ENSTBEG00000007814 Tupaia belangeri ENSTBEG00000007814 I 0.000
ENSTBEG00000012453 Tupaia belangeri ENSTBEG00000012453 I 0.000
ENSTBEG00000013569 Tupaia belangeri ENSTBEG00000013569 I 0.000
ENSTSYG00000005378 Tarsius syrichta ENSTSYG00000005378 I 0.000
Gfo_R016174 Geospiza fortis Gfo_R016174 I 0.000
HSF2 Vicugna pacos ENSVPAG00000009387 I 0.000
HSF2 Taeniopygia guttata ENSTGUG00000011838 I 0.000
HSF2 Pan troglodytes ENSPTRG00000018561 I 0.000
Hsf2 Rattus norvegicus ENSRNOG00000000808 I 0.000
HSF2 Bos taurus ENSBTAG00000012946 I 0.000
HSF2 Sus scrofa ENSSSCG00000004238 I 0.000
HSF2 Canis familiaris ENSCAFG00000000969 I 0.000
HSF2 Callithrix jacchus ENSCJAG00000003956 I 0.000
HSF2 Cavia porcellus ENSCPOG00000007509 I 0.000
hsf2 Danio rerio ENSDARG00000053097 D 0.000
HSF2 Loxodonta africana ENSLAFG00000006440 I 0.000
HSF2 Tursiops truncatus ENSTTRG00000000247 I 0.000
HSF2 Dasypus novemcinctus ENSDNOG00000031260 I 0.000
HSF2 Procavia capensis ENSPCAG00000016109 I 0.000
HSF2 Gorilla gorilla ENSGGOG00000023192 I 0.000
hsf2 Gasterosteus aculeatus ENSGACG00000004065 I 0.000
HSF2 Meleagris gallopavo ENSMGAG00000013320 I 0.000
HSF2 Homo sapiens ENSG00000025156 D 0.000
HSF2 Myotis lucifugus ENSMLUG00000002355 I 0.000
HSF2 Macaca mulatta ENSMMUG00000007910 I 0.000
HSF2 Monodelphis domestica ENSMODG00000017753 I 0.000
HSF2 Anolis carolinensis ENSACAG00000001260 I 0.000
Hsf2 Mus musculus ENSMUSG00000019878 D 0.000
HSF2 Echinops telfairi ENSETEG00000006154 I 0.000
HSF2 Ornithorhynchus anatinus ENSOANG00000014662 I 0.000
HSF2 Erinaceus europaeus ENSEEUG00000000435 I 0.000
HSF2 Oryctolagus cuniculus ENSOCUG00000025991 I 0.000
HSF2 Otolemur garnettii ENSOGAG00000015721 I 0.000
HSF2 Equus caballus ENSECAG00000012553 I 0.000
hsf2 Oryzias latipes ENSORLG00000015498 I 0.000
Hsf2 Dipodomys ordii ENSDORG00000012571 I 0.000
hsf2.L Xenopus laevis XB-GENE-954983 I 0.000
Myotis_brandtii_HSF2_10035618 Myotis brandtii Myotis_brandtii_HSF2_10035618 I 0.000
Ogr00694 Ophisaurus gracilis Ogr00694 I 0.000
Pvit_08961 Pogona vitticeps Pvit_08961 I 0.000
Tal_R003171 Tyto alba Tal_R003171 I 0.000
XP_002937261 Xenopus tropicalis XP_002937261 I 0.000
XP_002937262 Xenopus tropicalis XP_002937262 I 0.000
XP_002937263 Xenopus tropicalis XP_002937263 I 0.000