gene02674-v1.0-hybrid (Fragaria vesca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gene02674-v1.0-hybrid T228587_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna02674.1-v1.0-hybrid Homeodomain 466 524

Links

Other Homeodomain family TFs
Other Fragaria vesca TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.000
L892_g10708 Steinernema scapterisci L892_g10708 I 0.000
L889_g987 Steinernema feltiae L889_g987 I 0.000
L889_g9698 Steinernema feltiae L889_g9698 I 0.000
L889_g17146 Steinernema feltiae L889_g17146 I 0.000
L889_g10781 Steinernema feltiae L889_g10781 I 0.000
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.000
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.000
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.000
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.000
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.000
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.000
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.000
L892_g8140 Steinernema scapterisci L892_g8140 I 0.000
L892_g8144 Steinernema scapterisci L892_g8144 I 0.000
L892_g8145 Steinernema scapterisci L892_g8145 I 0.000
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.000
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.000
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.000
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.000
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.000
NECAME_01500 Necator americanus NECAME_01500 I 0.000
L898_g9580 Steinernema monticolum L898_g9580 I 0.000
L898_g28806 Steinernema monticolum L898_g28806 I 0.000
L898_g18539 Steinernema monticolum L898_g18539 I 0.000
L898_g10723 Steinernema monticolum L898_g10723 I 0.000
L893_g9517 Steinernema glaseri L893_g9517 I 0.000
L893_g4569 Steinernema glaseri L893_g4569 I 0.000
L893_g2090 Steinernema glaseri L893_g2090 I 0.000
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.000
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.000
CJA10576 Caenorhabditis japonica CJA10576 I 0.000
CJA07390 Caenorhabditis japonica CJA07390 I 0.000
CJA04414 Caenorhabditis japonica CJA04414 I 0.000
CBN24070 Caenorhabditis brenneri CBN24070 I 0.000
CBN18264 Caenorhabditis brenneri CBN18264 I 0.000
CBN16902 Caenorhabditis brenneri CBN16902 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN03440 Caenorhabditis brenneri CBN03440 I 0.000
CBG20699 Caenorhabditis briggsae CBG20699 I 0.000
CBG16375 Caenorhabditis briggsae CBG16375 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
CBG04789 Caenorhabditis briggsae CBG04789 I 0.000
CBG03688 Caenorhabditis briggsae CBG03688 I 0.000
CRE07801 Caenorhabditis remanei CRE07801 I 0.000
CRE09011 Caenorhabditis remanei CRE09011 I 0.000
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.000
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.000
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.000
PPA29361 Pristionchus pacificus PPA29361 I 0.000
CBG03687 Caenorhabditis briggsae CBG03687 I 0.000
PPA10478 Pristionchus pacificus PPA10478 I 0.000
PPA08785 Pristionchus pacificus PPA08785 I 0.000
CRE27659 Caenorhabditis remanei CRE27659 I 0.000
CRE17310 Caenorhabditis remanei CRE17310 I 0.000
CRE17354 Caenorhabditis remanei CRE17354 I 0.000
CRE17355 Caenorhabditis remanei CRE17355 I 0.000
CRE27174 Caenorhabditis remanei CRE27174 I 0.000
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N 0.000
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.000
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.000
L892_g8146 Steinernema scapterisci L892_g8146 N 0.000
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.000