gene09136-v1.0-hybrid (Fragaria vesca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gene09136-v1.0-hybrid T228594_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.761 0.732
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.761 0.732
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna09136.1-v1.0-hybrid Homeodomain 92 152

Links

Other Homeodomain family TFs
Other Fragaria vesca TFs

Invalid Input OrderBy

442 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action