Gorai.003G023300 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.003G023300 T228685_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G023300.1 Homeodomain 95 141
Gorai.003G023300.2 Homeodomain 94 140

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_6g007613 Medicago truncatula MTR_6g007613 N 0.746
nRc.2.0.1.g13634 Romanomermis culicivorax nRc.2.0.1.g13634 N 0.740
MCINX000790 Melitaea cinxia MCINX000790 N 0.731
CAA77673 Xenopus laevis CAA77673 I 0.727
lhx5.S Xenopus laevis XB-GENE-865965 I 0.727
PEQ_0000480201 Parascaris equorum PEQ_0000480201 N 0.724
lhx3.L Xenopus laevis XB-GENE-865930 I 0.722
L889_g12823 Steinernema feltiae L889_g12823 N 0.720
TVAG_170510 Trichomonas vaginalis TVAG_170510 N 0.715
LLOJ003025 Lutzomyia longipalpis LLOJ003025 N 0.713
BGLB008237 Biomphalaria glabrata BGLB008237 N 0.697
orange1.1g005863m.g Citrus sinensis orange1.1g005863m.g I 0.695
ENSPPYG00000005435 Pongo abelii ENSPPYG00000005435 N 0.692
TRE_0000556301 Trichobilharzia regenti TRE_0000556301 N 0.691
CGI_10009567 Crassostrea gigas CGI_10009567 N 0.689
SVUK_0000323501 Strongylus vulgaris SVUK_0000323501 N 0.686
ENSTRUG00000017521 Takifugu rubripes ENSTRUG00000017521 I 0.685
MCINX013555 Melitaea cinxia MCINX013555 N 0.684
SCUD_0000812001 Schistosoma curassoni SCUD_0000812001 N 0.684
ECPE_0000380901 Echinostoma caproni ECPE_0000380901 N 0.684
PEQ_0001057801 Parascaris equorum PEQ_0001057801 N 0.684
SROB_0000391301 Schistosoma rodhaini SROB_0000391301 N 0.684
ASIS021566 Anopheles sinensis ASIS021566 N 0.682
HPBE_0002557401 Heligmosomoides bakeri HPBE_0002557401 N 0.682
Cmyd_10012611 Chelonia mydas Cmyd_10012611 N 0.681
ENSETEG00000007628 Echinops telfairi ENSETEG00000007628 I 0.680
ENSMMUG00000030441 Macaca mulatta ENSMMUG00000030441 I 0.680
ENSMMUG00000032301 Macaca mulatta ENSMMUG00000032301 I 0.680
CJA41362 Caenorhabditis japonica CJA41362 N 0.679
CMU_000020 Cryptosporidium muris CMU_000020 N 0.679
nDi.2.2.2.g12219 Dirofilaria immitis nDi.2.2.2.g12219 N 0.678
CJA33058 Caenorhabditis japonica CJA33058 N 0.678
ENSPMAG00000009999 Petromyzon marinus ENSPMAG00000009999 N 0.677
ENSPMAG00000010256 Petromyzon marinus ENSPMAG00000010256 N 0.677
DILT_0001433701 Diphyllobothrium latum DILT_0001433701 N 0.676
ANCDUO_21488 Ancylostoma duodenale ANCDUO_21488 N 0.674
ANCDUO_21460 Ancylostoma duodenale ANCDUO_21460 N 0.674
MTR_3g112300 Medicago truncatula MTR_3g112300 I 0.674
Minc08600 Meloidogyne incognita Minc08600 N 0.672
LCUP014212 Lucilia cuprina LCUP014212 N 0.671
L898_g2802 Steinernema monticolum L898_g2802 N 0.671
GPLIN_001034800 Globodera pallida GPLIN_001034800 N 0.671
L798_12976 Zootermopsis nevadensis L798_12976 N 0.671
A_07772 Schistosoma haematobium A_07772 N 0.670
ENSXMAG00000019975 Xiphophorus maculatus ENSXMAG00000019975 N 0.670
ACAC_0000073601 Angiostrongylus cantonensis ACAC_0000073601 N 0.669
ACUA018278 Anopheles culicifacies ACUA018278 N 0.668
CpipJ_CPIJ015450 Culex pipiens CpipJ_CPIJ015450 N 0.668
CPIJ015450 Culex quinquefasciatus CPIJ015450 N 0.668
ACEP17701 Atta cephalotes ACEP17701 N 0.667
ORGLA08G0133100 Oryza glaberrima ORGLA08G0133100 N 0.666
OBART08G15250 Oryza barthii OBART08G15250 N 0.666
SINV18611 Solenopsis invicta SINV18611 N 0.666
ENSAPLG00000006966 Anas platyrhynchos ENSAPLG00000006966 N 0.660
EMIHUDRAFT_241459 Emiliania huxleyi EMIHUDRAFT_241459 N 0.660
SNAPOd2T00000484001 Oikopleura dioica SNAPOd2T00000484001 N 0.654
L893_g22533 Steinernema glaseri L893_g22533 N 0.652
PEQ_0001303101 Parascaris equorum PEQ_0001303101 N 0.650
ISCW021207 Ixodes scapularis ISCW021207 N 0.649
EVEC_0001028401 Enterobius vermicularis EVEC_0001028401 N 0.649
Brh_R000003 Buceros rhinoceros Brh_R000003 I 0.638
PEQ_0000908401 Parascaris equorum PEQ_0000908401 N 0.637
NBR_0001551701 Nippostrongylus brasiliensis NBR_0001551701 N 0.628
CTTNBP2NL Monodelphis domestica ENSMODG00000001211 N 0.628
ENSCSAVG00000002570 Ciona savignyi ENSCSAVG00000002570 N 0.628
EFV59239 Trichinella spiralis EFV59239 N 0.627
PHOX2A Homo sapiens ENSG00000165462 D 0.627
LotgiG178004 Lottia gigantea LotgiG178004 N 0.625
ENSSHAG00000016995 Sarcophilus harrisii ENSSHAG00000016995 N 0.624
AAA85030 Xenopus laevis AAA85030 N 0.623
hoxa4.S Xenopus laevis XB-GENE-865635 N 0.623
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.623
AAA85027 Xenopus laevis AAA85027 I 0.621
hoxa10.L Xenopus laevis XB-GENE-6486002 I 0.620
SROB_0000951501 Schistosoma rodhaini SROB_0000951501 N 0.619
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.619
D917_09995 Trichinella nativa D917_09995 I 0.619
MVLG_07150 Microbotryum violaceum MVLG_07150 N 0.614
Carubv10013054m.g Capsella rubella Carubv10013054m.g N 0.612
SCLCIDRAFT_1207514 Scleroderma citrinum SCLCIDRAFT_1207514 N 0.607
SMTD_0001546801 Schistosoma mattheei SMTD_0001546801 N 0.604
L892_g23489 Steinernema scapterisci L892_g23489 N 0.603
GLRG_06242 Colletotrichum graminicola GLRG_06242 N 0.600
SVUK_0001098001 Strongylus vulgaris SVUK_0001098001 N 0.599