Gorai.009G002500 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.009G002500 T228763_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.630 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G002500.1 Homeodomain 495 551
Gorai.009G002500.2 Homeodomain 495 551
Gorai.009G002500.3 Homeodomain 495 551
Gorai.009G002500.4 Homeodomain 495 545
Gorai.009G002500.5 Homeodomain 495 551
Gorai.009G002500.6 Homeodomain 495 545

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action