Lus10015900.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10015900.g T228870_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.622 0.630
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10015900 Homeodomain 130 187

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.824
Ca_12172 Cicer arietinum Ca_12172 I 0.824
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.746
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.746
mgf026503m Mimulus guttatus mgf026503m I 0.703
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.691
29983.m003297 Ricinus communis 29983.m003297 I 0.686
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.681
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.681
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.674
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.669
TCM_001660 Theobroma cacao TCM_001660 I 0.669
MDP0000804580 Malus domestica MDP0000804580 I 0.665
mgf024641m Mimulus guttatus mgf024641m I 0.660
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.654
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.654
Ca_02034 Cicer arietinum Ca_02034 I 0.652
Si020227m.g Setaria italica Si020227m.g I 0.644
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.643
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.642
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.642
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.642
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.641
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.627
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.622
ZHD7 Oryza sativa OS02G0706600 D 0.622
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.622
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.622
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.622
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.622
Pavir.J22932 Panicum virgatum Pavir.J22932 N 0.620
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.620
Traes_4AL_5659286D11 Triticum aestivum Traes_4AL_5659286D11 N 0.619