Lus10017688.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10017688.g T228878_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10017688 Homeodomain 35 91

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.773
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.773
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.773
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.773
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.772
29983.m003128 Ricinus communis 29983.m003128 I 0.772
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.772
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.772
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.768
Bo7g067190 Brassica oleracea Bo7g067190 I 0.766
Bra033725 Brassica rapa Bra033725 I 0.764
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.760
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.755
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.755
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.754
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.754
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.754
RLT2 Arabidopsis thaliana AT5G44180 I 0.739
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.736
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.736
TCM_008214 Theobroma cacao TCM_008214 I 0.735
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.735
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.735
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.735
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.732
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.728
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.728
PK06068.1 Cannabis sativa PK06068.1 I 0.723
Ca_11272 Cicer arietinum Ca_11272 I 0.722
MTR_4g078860 Medicago truncatula MTR_4g078860 N 0.691
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.690
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.690
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.686
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.675
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.669
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.669
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.668
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.631
Bra010869 Brassica rapa Bra010869 I 0.619
Bo3g143570 Brassica oleracea Bo3g143570 I 0.619
Cla008712 Citrullus lanatus Cla008712 I 0.612
MDP0000207866 Malus domestica MDP0000207866 I 0.611
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.608
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.602
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.601
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.601
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.601
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.599