Lus10023561.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10023561.g T228900_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA

TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.822 0.825
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN

NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.822 0.825
GRMZM2G038252
M02137_2.00
Zea mays
HTRATTGV

BCAATYAD
PBM
Weirauch et al.(2014)
pTH6141
0.809 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10023561 Homeodomain 107 168

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

Invalid Input OrderBy

343 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action