MDP0000238771 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000238771 T229036_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.763 0.745
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.711 0.636
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.711 0.636
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.708 0.800
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.708 0.800
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.706 0.745
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.706 0.745
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.706 0.745
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.669 0.764
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.669 0.764
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.669 0.745
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000238771 Homeodomain 160 214

Links

Other Homeodomain family TFs
Other Malus domestica TFs

691 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_06094 Capronia coronata A1O1_06094 N 0.000
A1O3_05625 Capronia epimyces A1O3_05625 N 0.000
A1O5_09655 Cladophialophora psammophila A1O5_09655 N 0.000
A1O7_03735 Cladophialophora yegresii A1O7_03735 N 0.000
A1O9_00579 Exophiala aquamarina A1O9_00579 N 0.000
AUEXF2481DRAFT_35357 Aureobasidium subglaciale AUEXF2481DRAFT_35357 N 0.000
BAUCODRAFT_71053 Baudoinia compniacensis BAUCODRAFT_71053 N 0.000
Bcin02g05110 Botrytis cinerea Bcin02g05110 N 0.000
CADAFLAG00009814 Aspergillus flavus CADAFLAG00009814 N 0.000
ANIA_04247 Aspergillus nidulans CADANIAG00004410 N 0.000
CADAORAG00000414 Aspergillus oryzae CADAORAG00000414 N 0.000
COCC4DRAFT_198330 Bipolaris maydis COCC4DRAFT_198330 N 0.000
COCCADRAFT_40248 Bipolaris zeicola COCCADRAFT_40248 N 0.000
COCMIDRAFT_31558 Bipolaris oryzae COCMIDRAFT_31558 N 0.000
COCSADRAFT_298423 Bipolaris sorokiniana COCSADRAFT_298423 N 0.000
COCVIDRAFT_42182 Bipolaris victoriae COCVIDRAFT_42182 N 0.000
DOTSEDRAFT_73264 Dothistroma septosporum DOTSEDRAFT_73264 N 0.000
EPUS_07060 Endocarpon pusillum EPUS_07060 N 0.000
EURHEDRAFT_407381 Aspergillus ruber EURHEDRAFT_407381 N 0.000
e_gw1.6.106.1 Mycosphaerella graminicola e_gw1.6.106.1 N 0.000
fgenesh1_pm.00129_#_102 Aspergillus carbonarius fgenesh1_pm.00129_#_102 N 0.000
G647_02028 Cladophialophora carrionii G647_02028 N 0.000
GMDG_05496 Pseudogymnoascus destructans GMDG_05496 N 0.000
HMPREF1120_03931 Exophiala dermatitidis HMPREF1120_03931 N 0.000
HMPREF1541_01554 Cyphellophora europaea HMPREF1541_01554 N 0.000
LEMA_P007270.1 Leptosphaeria maculans LEMA_P007270.1 N 0.000
M437DRAFT_58247 Aureobasidium melanogenum M437DRAFT_58247 N 0.000
M438DRAFT_341722 Aureobasidium pullulans M438DRAFT_341722 N 0.000
MBM_03061 Marssonina brunnea MBM_03061 N 0.000
MYCFIDRAFT_139431 Pseudocercospora fijiensis MYCFIDRAFT_139431 N 0.000
Mycgr3G43295 Zymoseptoria tritici Mycgr3G43295 N 0.000
OIDMADRAFT_168714 Oidiodendron maius OIDMADRAFT_168714 N 0.000
Pc13g02490 Penicillium chrysogenum Pc13g02490 N 0.000
PCH_Pc13g02490 Penicillium rubens PCH_Pc13g02490 N 0.000
PDE_02638 Penicillium oxalicum PDE_02638 N 0.000
PITC_088840 Penicillium italicum PITC_088840 N 0.000
PMAA_026040 Penicillium marneffei PMAA_026040 N 0.000
PMAA_026040 Talaromyces marneffei PMAA_026040 N 0.000
PTRG_11568 Pyrenophora triticirepentis PTRG_11568 N 0.000
PTT_14853 Pyrenophora teres PTT_14853 N 0.000
PV04_05609 Capronia semiimmersa PV04_05609 N 0.000
PV05_06830 Exophiala xenobiotica PV05_06830 N 0.000
PV06_04914 Exophiala oligosperma PV06_04914 N 0.000
PV07_08163 Cladophialophora immunda PV07_08163 N 0.000
PV08_10923 Exophiala spinifera PV08_10923 N 0.000
PV10_00661 Exophiala mesophila PV10_00661 N 0.000
PV11_05067 Exophiala sideris PV11_05067 N 0.000
PVAR5_1909 Byssochlamys spectabilis PVAR5_1909 N 0.000
SBOR_1756 Sclerotinia borealis SBOR_1756 N 0.000
SEPMUDRAFT_149101 Sphaerulina musiva SEPMUDRAFT_149101 N 0.000
SETTUDRAFT_117439 Setosphaeria turcica SETTUDRAFT_117439 N 0.000
SNOG_03308 Stagonospora nodorum SNOG_03308 N 0.000
SNOG_03309 Phaeosphaeria nodorum SNOG_03309 N 0.000
SS1G_11145 Sclerotinia sclerotiorum SS1G_11145 N 0.000
U727_00433680271 Penicillium solitum U727_00433680271 N 0.000
UCRNP2_7309 Neofusicoccum parvum UCRNP2_7309 N 0.000
V499_07479 Pseudogymnoascus pannorum V499_07479 N 0.000
W97_04778 Coniosporium apollinis W97_04778 N 0.000
Z517_11562 Fonsecaea pedrosoi Z517_11562 N 0.000
Z518_04782 Rhinocladiella mackenziei Z518_04782 N 0.000
Z519_10549 Cladophialophora bantiana Z519_10549 N 0.000