MDP0000250248 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000250248 T229043_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000250248 Homeodomain 94 141

Links

Other Homeodomain family TFs
Other Malus domestica TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_03990 Triticum urartu TRIUR3_03990 N 0.819
gene31986-v1.0-hybrid Fragaria vesca gene31986-v1.0-hybrid N 0.766
30202.m000250 Ricinus communis 30202.m000250 I 0.765
Bra034855 Brassica rapa Bra034855 N 0.753
OLONG_015615 Oryza longistaminata OLONG_015615 N 0.718
OBART08G07280 Oryza barthii OBART08G07280 N 0.700
ONIVA03G16810 Oryza nivara ONIVA03G16810 N 0.692
OMERI03G30000 Oryza meridionalis OMERI03G30000 N 0.686
Ca_12504 Cicer arietinum Ca_12504 N 0.676
Bra002576 Brassica rapa Bra002576 N 0.673
OB05G33420 Oryza brachyantha OB05G33420 N 0.655
GRMZM2G419252 Zea mays GRMZM2G419252 N 0.653
MDP0000854437 Malus domestica MDP0000854437 N 0.647
MDP0000874562 Malus domestica MDP0000874562 N 0.647
PK01458.1 Cannabis sativa PK01458.1 N 0.645
Bra020321 Brassica rapa Bra020321 N 0.643
EMIHUDRAFT_459477 Emiliania huxleyi EMIHUDRAFT_459477 N 0.640
maker-nMf.1.1.scaf10679-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf10679-snap-gene-0.4 I 0.625
MhA1_Contig878.frz3.gene2 Meloidogyne hapla MhA1_Contig878.frz3.gene2 I 0.625
maker-nMf.1.1.scaf06360-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf06360-augustus-gene-0.6 I 0.625
Cucsa.213810 Cucumis sativus Cucsa.213810 N 0.622
PITX1 Homo sapiens ENSG00000069011 D 0.604
genemark-nMf.1.1.scaf05885-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf05885-processed-gene-0.2 I 0.603
Aan_R000006 Calypte anna Aan_R000006 I 0.603
ENSACAG00000012070 Anolis carolinensis ENSACAG00000012070 I 0.603
maker-nMf.1.1.scaf05852-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf05852-augustus-gene-0.4 I 0.603
BGLB001192 Biomphalaria glabrata BGLB001192 I 0.602
Traes_1AL_489411063 Triticum aestivum Traes_1AL_489411063 N 0.602
EMX2 Choloepus hoffmanni ENSCHOG00000004674 I 0.600
emx3 Danio rerio ENSDARG00000020417 I 0.600
ALUE_0000610701 Ascaris lumbricoides ALUE_0000610701 I 0.600
emx3 Tetraodon nigroviridis ENSTNIG00000012965 I 0.600
ENSAMEG00000004941 Ailuropoda melanoleuca ENSAMEG00000004941 I 0.600
CPIJ009086 Culex quinquefasciatus CPIJ009086 I 0.600
SMUV_0000791901 Syphacia muris SMUV_0000791901 I 0.600
PXEA_0002876601 Protopolystoma xenopodis PXEA_0002876601 I 0.600
nOo.2.0.1.g11932 Onchocerca ochengi nOo.2.0.1.g11932 I 0.600
ACEP22767 Atta cephalotes ACEP22767 I 0.600
CpipJ_CPIJ009086 Culex pipiens CpipJ_CPIJ009086 I 0.600
AFUN001618 Anopheles funestus AFUN001618 I 0.600
ENSTSYG00000007023 Tarsius syrichta ENSTSYG00000007023 I 0.600
MESCA002805 Megaselia scalaris MESCA002805 I 0.600
RPRC010410 Rhodnius prolixus RPRC010410 I 0.600
SINV25862 Solenopsis invicta SINV25862 I 0.600
AALB004916 Anopheles albimanus AALB004916 I 0.600
emx1 Takifugu rubripes ENSTRUG00000003603 I 0.600
AALB002056 Anopheles albimanus AALB002056 I 0.600
emx1 Takifugu rubripes ENSTRUG00000001305 I 0.600
Minc06164 Meloidogyne incognita Minc06164 I 0.600
DILT_0001120301 Diphyllobothrium latum DILT_0001120301 I 0.599
MDP0000316517 Malus domestica MDP0000316517 I 0.326