MDP0000288192 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000288192 T229060_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN

NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.843 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000288192 Homeodomain 439 495

Links

Other Homeodomain family TFs
Other Malus domestica TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH57 Arabidopsis thaliana AT4G01460 N 0.000
BHLH71 Arabidopsis thaliana AT5G46690 N 0.000
Bo7g075600 Brassica oleracea Bo7g075600 N 0.000
Bo9g004020 Brassica oleracea Bo9g004020 N 0.000
Bo9g065460 Brassica oleracea Bo9g065460 N 0.000
Bostr.28243s0066 Boechera stricta Bostr.28243s0066 N 0.000
Bostr.7365s0007 Boechera stricta Bostr.7365s0007 N 0.000
Bra017533 Brassica rapa Bra017533 N 0.000
Bra025007 Brassica rapa Bra025007 N 0.000
Bra037414 Brassica rapa Bra037414 N 0.000
Cagra.10175s0007 Capsella grandiflora Cagra.10175s0007 N 0.000
Carubv10001470m.g Capsella rubella Carubv10001470m.g N 0.000
Carubv10026748m.g Capsella rubella Carubv10026748m.g N 0.000
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.000
e_gw1.519.9.1 Physcomitrella patens e_gw1.519.9.1 N 0.000
bHLH071 Arabidopsis lyrata fgenesh2_kg.8__126__AT5G46690.1 N 0.000
GSMUA_Achr10G19180_001 Musa acuminata GSMUA_Achr10G19180_001 N 0.000
MLOC_10595 Hordeum vulgare MLOC_10595 N 0.000
Thhalv10000961m.g Eutrema salsugineum Thhalv10000961m.g N 0.000
Thhalv10028815m.g Eutrema salsugineum Thhalv10028815m.g N 0.000
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N 0.000
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N 0.000
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N 0.000